RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 OR6V1Q8N148 313 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 NKAIN3Q8N8D7 197 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 TXNIPQ9H3M7 391 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 FGF20Q9NP95 211 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 SMCO3A2RU48 225 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 TMEM221A6NGB7 291 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ARGFXA6NJG6 315 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 SGCEO43556 437 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 TPOP07202 933 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 EPHA1P21709 976 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ABCD3P28288 659 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 HNRNPFP52597 415 aaKnown RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 STEAP1BQ6NZ63 245 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 FAM199XQ6PEV8 388 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 GPR119Q8TDV5 335 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 A0A1W2PQF6 199 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 FITM1A5D6W6 292 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF705EA8MWA4 302 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 CXCL13O43927 109 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 CPT2P23786 658 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ZIC1Q15915 447 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF628Q5EBL2 1059 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 VHLLQ6RSH7 139 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF679Q8IYX0 411 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 APH1AQ96BI3 265 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF223Q9UK11 482 aaPredicted RBP12.93□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
NPHP4-208ENST00000478423 LOC100289279A0A1B0GTE1 492 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SPINT1O43278 529 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 FUCA1P04066 466 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 MSR1P21757 451 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SSTR2P30874 369 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 CDK5R1Q15078 307 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SLC9A3R2Q15599 337 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 OR2I1PQ8NGU4 316 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SMIM19Q96E16 107 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 MRGPRX4Q96LA9 322 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 ISG20L2Q9H9L3 353 aaKnown RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 KCNG2Q9UJ96 466 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SIGLEC7Q9Y286 467 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SLC5A6Q9Y289 635 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 RAF1P04049 648 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 ELK1P19419 428 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 CCR6P51684 374 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 HMGA2P52926 109 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 SPACA9Q96E40 222 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 EDEM2Q9BV94 578 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 C20orf141Q9NUB4 165 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 TRBV5-3A0A0A0MS03 114 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 ACTL6BO94805 426 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 C21orf58P58505 322 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 RAP2BP61225 183 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 RIPPLY1Q0D2K3 151 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 FOXF1Q12946 379 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 TMPRSS11FQ6ZWK6 438 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 PGAP1Q75T13 922 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 Q7L0L9 218 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 GPR155Q7Z3F1 870 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 ADGRE4PQ86SQ3 457 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 C10orf111Q8N326 155 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 OR4Q3Q8NH05 313 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 DVL3Q92997 716 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 YIPF6Q96EC8 236 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 EIF5A2Q9GZV4 153 aaKnown RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 TSPAN10Q9H1Z9 355 aaPredicted RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 ZNF286AQ9HBT8 521 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 ISYNA1Q9NPH2 558 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 TMEM9BQ9NQ34 198 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 MTCH2Q9Y6C9 303 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 A0A0B4J2E0 115 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 A0A1B0GX12 115 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 A0A1W2PS29 197 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 APEHP13798 732 aaKnown RBP12.92□□□□□ -0.34
NPHP4-208ENST00000478423 RFC3P40938 356 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 TAS2R46P59540 309 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 FAM27D1Q5T7N8 215 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 GLIPR1L1Q6UWM5 242 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 BHLHE23Q8NDY6 225 aa12.92□□□□□ -0.34
NPHP4-208ENST00000478423 PIKFYVEQ9Y2I7 2098 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 HSPB6O14558 160 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 BET1O15155 118 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 ATG12O94817 140 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 TNFSF15O95150 251 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 BPNT1O95861 308 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 CT62P0C5K7 136 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 ACHEP22303 614 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 IL2RGP31785 369 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 IKZF1Q13422 519 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 C12orf73Q69YU5 71 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 OVCH1Q7RTY7 1134 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 GLYATL2Q8WU03 294 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 SIGLEC11Q96RL6 698 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
NPHP4-208ENST00000478423 SLC22A13Q9Y226 551 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms