RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 ALDH16A1Q8IZ83 802 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 ZCCHC24Q8N2G6 241 aaKnown RBP11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 OR52J3Q8NH60 311 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 GNPDA2Q8TDQ7 276 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 NABP1Q96AH0 204 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 LRGUKQ96M69 825 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 BCL2L14Q9BZR8 327 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 RNF121Q9H920 327 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 VSX1Q9NZR4 365 aaPredicted RBP11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 CMAHPQ9Y471 501 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 UGT2A1Q9Y4X1 527 aa11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
SOX2-OT-208ENST00000477928 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 ATP5HO75947 161 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 DIRAS1O95057 198 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 SLC2A10O95528 541 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 ATP6V1B2P21281 511 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 MSR1P21757 451 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 SLC6A6P31641 620 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 RAD52P43351 418 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 GSSP48637 474 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 RASSF2P50749 326 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 ERVK-25P63136 954 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 TSPAN31Q12999 210 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 SNTB2Q13425 540 aaKnown RBP11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 RAB39AQ14964 217 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 RFX4Q33E94 735 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 IGFN1Q86VF2 1251 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 ZNF584Q8IVC4 421 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 CLDN22Q8N7P3 220 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 SLC30A7Q8NEW0 376 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 OR10H5Q8NGA6 315 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 RAB1BQ9H0U4 201 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 LYVE1Q9Y5Y7 322 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 V9GYQ6 96 aa11.91□□□□□ -0.5
SOX2-OT-208ENST00000477928 HIVEP2P31629 2446 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 RTTNQ86VV8 2226 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 TEX13CA0A0J9YWL9 993 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 TMEM129A0AVI4 362 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 C12orf71A8MTZ7 269 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 KIAA1324LA8MWY0 1029 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 NDUFS8O00217 210 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 TNFRSF11BO00300 401 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 GYG2O15488 501 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 ICMTO60725 284 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 RAP2AP10114 183 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 COX5BP10606 129 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 SLC25A16P16260 332 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 ZNF26P17031 533 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 CRABP1P29762 137 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 APLNRP35414 380 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 SELENOVP59797 346 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 HSF2Q03933 536 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 FMODQ06828 376 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 KRR1Q13601 381 aaKnown RBP11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 MESTQ5EB52 335 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 DNM1P34Q6PK57 102 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 SVOPLQ8N434 492 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 FANK1Q8TC84 345 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 NEU4Q8WWR8 484 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 MRPL24Q96A35 216 aaKnown RBP11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 DOK1Q99704 481 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 RHNO1Q9BSD3 238 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 BTBD10Q9BSF8 475 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 CDH20Q9HBT6 801 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 GPR160Q9UJ42 338 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 TIMM10BQ9Y5J6 103 aa11.9□□□□□ -0.5
SOX2-OT-208ENST00000477928 ACOT8O14734 319 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 KHDRBS3O75525 346 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 CCL2P13500 99 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 GSTM3P21266 225 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 TUBG1P23258 451 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 LAP3P28838 519 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 MS4A2Q01362 244 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 SCRN3Q0VDG4 424 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 MOGQ16653 247 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 OR2T5Q6IEZ7 315 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 LRP11Q86VZ4 500 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 LRRC18Q8N456 261 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 PAQR4Q8N4S7 273 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 OR2T29Q8NH02 315 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 C10orf105Q8TEF2 133 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 IPCEF1Q8WWN9 437 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 NSMAFQ92636 917 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 Q96M85 177 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 OR52D1Q9H346 318 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 MS4A5Q9H3V2 200 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 YY1AP1Q9H869 796 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 REEP1Q9H902 201 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 POLE4Q9NR33 117 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 NDRG4Q9ULP0 352 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-208ENST00000477928 FZR1Q9UM11 496 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms