RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 APOC1P02654 83 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 FTH1P19P0C7X4 201 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 UBCP0CG48 685 aaKnown RBP7.08□□□□□ -1.28
VMA21-203ENST00000477649 CALCBP10092 127 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 EPXP11678 715 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 HLA-DOBP13765 273 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 IL11P20809 199 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 SFTPDP35247 375 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 CD97P48960 835 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 MMP16P51512 607 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 SUCLG1P53597 346 aaKnown RBP7.08□□□□□ -1.28
VMA21-203ENST00000477649 STK11Q15831 433 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 BCL2A1Q16548 175 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 HYAL4Q2M3T9 481 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 C10orf128Q5T292 105 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 IDNKQ5T6J7 187 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 TMEM244Q5VVB8 128 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 STEAP3Q658P3 488 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 PYHIN1Q6K0P9 492 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 SLC25A47Q6Q0C1 308 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 KLHL24Q6TFL4 600 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 RPTNQ6XPR3 784 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 MDGA2Q7Z553 956 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.08□□□□□ -1.28
VMA21-203ENST00000477649 RFLNBQ8N5W9 214 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 POC5Q8NA72 575 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 CCDC54Q8NEL0 328 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 OR2AJ1Q8NGZ0 328 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 OR14L1PQ8NHC6 308 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 RNF133Q8WVZ7 376 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 JSRP1Q96MG2 331 aaPredicted RBP7.08□□□□□ -1.28
VMA21-203ENST00000477649 SFXN2Q96NB2 322 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 DCLRE1CQ96SD1 692 aaKnown RBP7.08□□□□□ -1.28
VMA21-203ENST00000477649 NPAS1Q99742 590 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 ABHD6Q9BV23 337 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 MIXL1Q9H2W2 232 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 PARD6AQ9NPB6 346 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 CYSLTR2Q9NS75 346 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 FRRS1LQ9P0K9 344 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 COMMD3Q9UBI1 195 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 CKLFQ9UBR5 152 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 SPATA2Q9UM82 520 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 GRIP1Q9Y3R0 1128 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 ETV7Q9Y603 341 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 V9GY05 133 aa7.08□□□□□ -1.28
VMA21-203ENST00000477649 TRBV5-7A0A0A0MS05 114 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 A0A0G2JK05 382 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 A0A1W2PNR3 127 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 LRRC3CA6NJW4 275 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 OR6C65A6NJZ3 312 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 KLRC4-KLRK1H3BQV0 150 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 AIPO00170 330 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 RPP14O95059 124 aaKnown RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 HLA-DQB1P01920 261 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 HPNP05981 417 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 H2BFMP0C1H6 154 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 LIPCP11150 499 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 IL7P13232 177 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CEACAM1P13688 526 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CD46P15529 392 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 FSTP19883 344 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ACHEP22303 614 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ENPP1P22413 925 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ITGA3P26006 1051 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CD96P40200 585 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 PSMB10P40306 273 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CSNK1A1P48729 337 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ZNF84P51523 738 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CARD18P57730 90 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 B3GALT5-AS1P59052 145 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 NANOS3P60323 173 aaKnown RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 GRB2P62993 217 aaKnown RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 GABREP78334 506 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 MRPS10P82664 201 aaKnown RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 IFITM3Q01628 133 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 FOXO1Q12778 655 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ASAH1Q13510 395 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 INPP5JQ15735 1006 aaPredicted RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 AGAP7PQ5VUJ5 663 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 TRIQKQ629K1 86 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 B3GNTL1Q67FW5 361 aaPredicted RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 MZT2BQ6NZ67 158 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CNIH2Q6PI25 160 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 FOXL2NBQ6ZUU3 175 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CREB3L2Q70SY1 520 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 GPAT4Q86UL3 456 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 CATSPERDQ86XM0 798 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 OR8H2Q8N162 312 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 KDM8Q8N371 416 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 C19orf18Q8NEA5 215 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 OR9K2Q8NGE7 335 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 OR2V1Q8NHB1 315 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 SMAP2Q8WU79 429 aaPredicted RBP7.07□□□□□ -1.28
VMA21-203ENST00000477649 RAB40AQ8WXH6 277 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 TMEM54Q969K7 222 aa7.07□□□□□ -1.28
VMA21-203ENST00000477649 ITFG2Q969R8 447 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms