RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CASQ2O14958 399 aaPredicted RBP13.83□□□□□ -0.2
COPS3-207ENST00000477299 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 GAAP10253 952 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 SPI1P17947 270 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 UBE2NP61088 152 aaKnown RBP13.83□□□□□ -0.2
COPS3-207ENST00000477299 EFNB1P98172 346 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 SLC34A1Q06495 639 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 SPOCK1Q08629 439 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 DAZAP2Q15038 168 aaPredicted RBP13.83□□□□□ -0.2
COPS3-207ENST00000477299 SNAPC1Q16533 368 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 FAM27BQ5VT28 67 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 P2RY8Q86VZ1 359 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 C17orf78Q8N4C9 275 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 TCEANCQ8N8B7 351 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 ZNF511Q8NB15 262 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 FNDC8Q8TC99 324 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 PIK3IP1Q96FE7 263 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 IL4I1Q96RQ9 567 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 GRIP2Q9C0E4 1043 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 SIAEQ9HAT2 523 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 MRPL22Q9NWU5 206 aaKnown RBP13.83□□□□□ -0.2
COPS3-207ENST00000477299 KCNN3Q9UGI6 736 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 AMDHD2Q9Y303 409 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 FKBP7Q9Y680 259 aa13.83□□□□□ -0.2
COPS3-207ENST00000477299 CENPEQ02224 2701 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 IGHV1-18A0A0C4DH31 117 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 A6NNC1 897 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 M0R1B8 84 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 HRGP04196 525 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 HMGN1P05114 100 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 MMP7P09237 267 aaPredicted RBP13.82□□□□□ -0.2
COPS3-207ENST00000477299 ZNF32P17041 273 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 RPS27P42677 84 aaKnown RBP13.82□□□□□ -0.2
COPS3-207ENST00000477299 RAB1AP62820 205 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 BSPH1Q075Z2 132 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 LINC01590Q5TEZ4 76 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 SLC16A14Q7RTX9 510 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 ZNF584Q8IVC4 421 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 GLB1L2Q8IW92 636 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 NEUROG1Q92886 237 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 OR51V1Q9H2C8 321 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 ZNF226Q9NYT6 803 aa13.82□□□□□ -0.2
COPS3-207ENST00000477299 AKAP6Q13023 2319 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 FAM221AA4D161 298 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 TLX2O43763 284 aaPredicted RBP13.81□□□□□ -0.2
COPS3-207ENST00000477299 CTAG2O75638 210 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 ATP6V1G2O95670 118 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 IFNGP01579 166 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 NR2C1P13056 603 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 HOXB1P14653 301 aaPredicted RBP13.81□□□□□ -0.2
COPS3-207ENST00000477299 CBR1P16152 277 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 ZNF3P17036 446 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 MSR1P21757 451 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 CRABP1P29762 137 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 PEX19P40855 299 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 PTDSS1P48651 473 aaKnown RBP13.81□□□□□ -0.2
COPS3-207ENST00000477299 IDH3GP51553 393 aaPredicted RBP13.81□□□□□ -0.2
COPS3-207ENST00000477299 SLC25A1P53007 311 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 RAD23AP54725 363 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 TLE4Q04727 773 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 RAB39AQ14964 217 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 NCMAPQ5T1S8 102 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 CORO6Q6QEF8 472 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 CXXC5Q7LFL8 322 aaKnown RBP13.81□□□□□ -0.2
COPS3-207ENST00000477299 LINC00346Q8IVM7 164 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 PROKR2Q8NFJ6 384 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 SLC26A10Q8NG04 563 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
COPS3-207ENST00000477299 RACGAP1Q9H0H5 632 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 WDR76Q9H967 626 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 FAM118AQ9NWS6 357 aa13.81□□□□□ -0.2
COPS3-207ENST00000477299 RAI1Q7Z5J4 1906 aaPredicted RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 FBN2P35556 2912 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 PRR23D1E9PI22 279 aaPredicted RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 CLIC3O95833 236 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 WNT11O96014 354 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 CECR9P0C854 216 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 PRR23D2P0DMB1 279 aaPredicted RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 CCL2P13500 99 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 NPR2P20594 1047 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 SLC2A5P22732 501 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 HOXC12P31275 282 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 PSG4Q00888 419 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 TEKQ02763 1124 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 KCNMB1Q16558 191 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 GSG1Q2KHT4 349 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 CPEB3Q8NE35 698 aaKnown RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 OR2T4Q8NH00 348 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 LILRB1Q8NHL6 650 aaPredicted RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 NRGNQ92686 78 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 ZMYND19Q96E35 227 aaPredicted RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 PLEKHA8Q96JA3 519 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 HRASLS5Q96KN8 279 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 USB1Q9BQ65 265 aaKnown RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 WNT5BQ9H1J7 359 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 RNF121Q9H920 327 aa13.8□□□□□ -0.2
COPS3-207ENST00000477299 CRNNQ9UBG3 495 aaPredicted RBP13.8□□□□□ -0.2
COPS3-207ENST00000477299 ORC6Q9Y5N6 252 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms