RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 NMNAT3Q96T66 252 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 PRRG3Q9BZD7 231 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 FN3KQ9H479 309 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 PARPBPQ9NWS1 579 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 GPR52Q9Y2T5 361 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 EMC9Q9Y3B6 208 aa10.13□□□□□ -0.79
LSM2-212ENST00000477182 PRSS37A4D1T9 235 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 OR6C68A6NDL8 312 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 FAM183AA6NL82 134 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 SLC43A1O75387 559 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 TNFSF13O75888 250 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 RENP00797 406 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 IGHV3-9P01782 118 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 CRHP06850 196 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 ZNF3P17036 446 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 OR3A2P47893 321 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 CSNK1A1P48729 337 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 FMODQ06828 376 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 CD47Q08722 323 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 FAM27E3Q08E93 113 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 ITGADQ13349 1161 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 PHYHD1Q5SRE7 291 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 C20orf196Q8IYI0 205 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 DEPDC4Q8N2C3 294 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 NPEPL1Q8NDH3 523 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 OR6K3Q8NGY3 331 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 OR6N1Q8NGY5 312 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 TMEM163Q8TC26 289 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 APH1AQ96BI3 265 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 OTULINQ96BN8 352 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 MUS81Q96NY9 551 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 APOL4Q9BPW4 351 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 ALG12Q9BV10 488 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 MRPL13Q9BYD1 178 aaKnown RBP10.12□□□□□ -0.79
LSM2-212ENST00000477182 MED20Q9H944 212 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 HINT3Q9NQE9 182 aaKnown RBP10.12□□□□□ -0.79
LSM2-212ENST00000477182 AASSQ9UDR5 926 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 RAB26Q9ULW5 256 aa10.12□□□□□ -0.79
LSM2-212ENST00000477182 SLC22A23A1A5C7 686 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 PRR23D1E9PI22 279 aaPredicted RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 M0R3G1 203 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 UPK3AO75631 287 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 PRR23D2P0DMB1 279 aaPredicted RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 CD79BP40259 229 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 EFNB1P98172 346 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 IL5RAQ01344 420 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 IL18R1Q13478 541 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 TSPO2Q5TGU0 170 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 LIPNQ5VXI9 398 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 PLBD1Q6P4A8 553 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 USP51Q70EK9 711 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 BCDIN3DQ7Z5W3 292 aaKnown RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 CPOQ8IVL8 374 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 ENTHD1Q8IYW4 607 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 C8orf59Q8N0T1 100 aaPredicted RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 GPR137CQ8N3F9 429 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 ZNF611Q8N823 705 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 SETD9Q8NE22 299 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 BBS1Q8NFJ9 593 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 OR8J1Q8NGP2 316 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 OR9Q1Q8NGQ5 310 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 TMEM54Q969K7 222 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 NMD3Q96D46 503 aaKnown RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 STARD4Q96DR4 205 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 TSSK2Q96PF2 358 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 SNX18Q96RF0 628 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 DDOQ99489 341 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 HCAR1Q9BXC0 346 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 SHARPINQ9H0F6 387 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 SYT4Q9H2B2 425 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 SLCO5A1Q9H2Y9 848 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 RERGLQ9H628 205 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 RPRD1BQ9NQG5 326 aaKnown RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 SLC7A10Q9NS82 523 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 GLTPQ9NZD2 209 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 DNAJC27Q9NZQ0 273 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 VSX1Q9NZR4 365 aaPredicted RBP10.11□□□□□ -0.79
LSM2-212ENST00000477182 PRSS50Q9UI38 385 aa10.11□□□□□ -0.79
LSM2-212ENST00000477182 IGKV1D-43A0A0B4J1Z2 117 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 CENPBD1B2RD01 187 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 DCTN6O00399 190 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 AHCYL1O43865 530 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 SMNDC1O75940 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSM2-212ENST00000477182 KRT33AO76009 404 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 GYPBP06028 91 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 QDPRP09417 244 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 CLUP10909 449 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 CTLA4P16410 223 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 PAICSP22234 425 aaKnown RBP10.1□□□□□ -0.79
LSM2-212ENST00000477182 LOXP28300 417 aaPredicted RBP10.1□□□□□ -0.79
LSM2-212ENST00000477182 PYCR1P32322 319 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 SNRPGP62308 76 aaKnown RBP10.1□□□□□ -0.79
LSM2-212ENST00000477182 HIST3H3Q16695 136 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 LRFN4Q6PJG9 635 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 TFAP2EQ6VUC0 442 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 ZNF704Q6ZNC4 412 aaPredicted RBP10.1□□□□□ -0.79
LSM2-212ENST00000477182 LINGO2Q7L985 606 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 UBE2J2Q8N2K1 259 aa10.1□□□□□ -0.79
LSM2-212ENST00000477182 RHOXF1Q8NHV9 184 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms