RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 C7orf66A4D0T2 115 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 H0YC42 278 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 HRGP04196 525 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 CD37P11049 281 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 BCL2A1Q16548 175 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 ZNF239Q16600 458 aaKnown RBP10.28□□□□□ -0.76
NUP188-205ENST00000477069 ODF4Q2M2E3 257 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 BTBD16Q32M84 506 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 RNASE12Q5GAN4 147 aaKnown RBP10.28□□□□□ -0.76
NUP188-205ENST00000477069 C3orf33Q6P1S2 294 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 DNM1P34Q6PK57 102 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 DNM1P46Q6ZS02 220 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 KRT77Q7Z794 578 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 TP63Q9H3D4 680 aaPredicted RBP10.28□□□□□ -0.76
NUP188-205ENST00000477069 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 GPN3Q9UHW5 284 aaPredicted RBP10.28□□□□□ -0.76
NUP188-205ENST00000477069 MRPS7Q9Y2R9 242 aaKnown RBP10.28□□□□□ -0.76
NUP188-205ENST00000477069 HS3ST3B1Q9Y662 390 aa10.28□□□□□ -0.76
NUP188-205ENST00000477069 SULT1B1O43704 296 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 GDNFP39905 211 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 RIDAP52758 137 aaKnown RBP10.27□□□□□ -0.76
NUP188-205ENST00000477069 CD83Q01151 205 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 PLA2G7Q13093 441 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 SNTA1Q13424 505 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 OR7E24Q6IFN5 339 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 FAM166AQ6J272 317 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 SCMH1Q96GD3 660 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 BEX2Q9BXY8 128 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 G6PC2Q9NQR9 355 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 PISDQ9UG56 409 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 NUBP2Q9Y5Y2 271 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 R4GMQ9 66 aa10.27□□□□□ -0.76
NUP188-205ENST00000477069 TEX51A0A1B0GUA7 166 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 A0A1W2PQ72 361 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 GABARAPH6UMI1 98 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 MAS1P04201 325 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 IGFBP3P17936 291 aaPredicted RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 TMPRSS12Q86WS5 348 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 ASB5Q8WWX0 329 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 SH2D2AQ9NP31 389 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 ZNF275Q9NSD4 429 aaPredicted RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 KLHL9Q9P2J3 617 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 STEAP1Q9UHE8 339 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 FBXL3Q9UKT7 428 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 RPH3AQ9Y2J0 694 aaPredicted RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 A0A0A6YYJ9 748 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 CENPXA8MT69 81 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 KHDRBS3O75525 346 aaKnown RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 TPPPO94811 219 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 TCRBP04435 133 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 ISG15P05161 165 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 KLK3P07288 261 aaPredicted RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 ADH6P28332 368 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 BIDP55957 195 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 SF3B4Q15427 424 aaKnown RBP eCLIP10.27□□□□□ -0.772e-7■■■■■ 29.1
NUP188-205ENST00000477069 EXT1Q16394 746 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 LINGO2Q7L985 606 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 NOXA1Q86UR1 476 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 SERPINA12Q8IW75 414 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 OR5M1Q8NGP8 315 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 M1APQ8TC57 530 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 TSEN15Q8WW01 171 aaKnown RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 GCDHQ92947 438 aaPredicted RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 MR1Q95460 341 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 C5orf34Q96MH7 638 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 GHITMQ9H3K2 345 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 PROK2Q9HC23 129 aa10.27□□□□□ -0.77
NUP188-205ENST00000477069 DDX28Q9NUL7 540 aaKnown RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 PTRH2Q9Y3E5 179 aaKnown RBP10.27□□□□□ -0.77
NUP188-205ENST00000477069 PHF3Q92576 2039 aaKnown RBP10.26□□□□□ -0.77
NUP188-205ENST00000477069 PCSK5Q92824 1860 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 ANXA2P2A6NMY6 339 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 ZNF814B7Z6K7 855 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 H3BSH0 61 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 TRAF3IP2O43734 574 aaPredicted RBP10.26□□□□□ -0.77
NUP188-205ENST00000477069 ANXA2P07355 339 aaKnown RBP10.26□□□□□ -0.77
NUP188-205ENST00000477069 GP1BAP07359 652 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 FSTP19883 344 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 ACP1P24666 158 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 CDK2P24941 298 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 GIFP27352 417 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 ART1P52961 327 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 MTFR2Q6P444 385 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 DEGS2Q6QHC5 323 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 NDUFAF7Q7L592 441 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 DCXRQ7Z4W1 244 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 ZNF227Q86WZ6 799 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 GLB1L2Q8IW92 636 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 OR2Y1Q8NGV0 311 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 OR52I2Q8NH67 350 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 CAPSLQ8WWF8 208 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 AKAP1Q92667 903 aaKnown RBP eCLIP10.26□□□□□ -0.77
NUP188-205ENST00000477069 S100A16Q96FQ6 103 aaKnown RBP10.26□□□□□ -0.77
NUP188-205ENST00000477069 TRAF4Q9BUZ4 470 aaPredicted RBP10.26□□□□□ -0.77
NUP188-205ENST00000477069 NUDT15Q9NV35 164 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 MCUBQ9NWR8 336 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 COPZ2Q9P299 210 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 WDR87Q6ZQQ6 2873 aa10.26□□□□□ -0.77
NUP188-205ENST00000477069 KIAA1549Q9HCM3 1950 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms