RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 OAFQ86UD1 273 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 OR1J2Q8NGS2 313 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 SLC7A13Q8TCU3 470 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 ELAC2Q9BQ52 826 aaKnown RBP15.86■□□□□ 0.13
COL7A1-209ENST00000474432 NMNAT1Q9HAN9 279 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-209ENST00000474432 ZNF275Q9NSD4 429 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-209ENST00000474432 ENPP4Q9Y6X5 453 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 GSTA4O15217 222 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 LCKP06239 509 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 ACHEP22303 614 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 STOMP27105 288 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 IFNA8P32881 189 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 RAD52P43351 418 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 SLC9A3P48764 834 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 KLF3P57682 345 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-209ENST00000474432 ERVK-25P63136 954 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 MRPS11P82912 194 aaKnown RBP15.85■□□□□ 0.13
COL7A1-209ENST00000474432 HSF2Q03933 536 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 CR1LQ2VPA4 569 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 FKBP9P1Q75LS8 142 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 FAM122BQ7Z309 247 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 FAM86B1Q8N7N1 296 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 CLDND2Q8NHS1 167 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 C11orf40Q8WZ69 217 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 C7orf34Q96L11 122 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 RBP7Q96R05 134 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 BCL2L14Q9BZR8 327 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 OR2H1Q9GZK4 316 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 HINT3Q9NQE9 182 aaKnown RBP15.85■□□□□ 0.13
COL7A1-209ENST00000474432 ADAM18Q9Y3Q7 739 aa15.85■□□□□ 0.13
COL7A1-209ENST00000474432 H7C1C5 153 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 ICMTO60725 284 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 PTP4A3O75365 173 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 IGHV3-13P01766 116 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 CST2P09228 141 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 SRD5A1P18405 259 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 APLNRP35414 380 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 LIMS1P48059 325 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 LCN6P62502 163 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 CCNIQ14094 377 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 NKPD1Q17RQ9 610 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 MESTQ5EB52 335 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 FAM205BPQ63HN1 556 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 UGT2A3Q6UWM9 527 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 ZNF730Q6ZMV8 503 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 LINC01356Q8N9X3 169 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 OR1J1Q8NGS3 322 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 MARS2Q96GW9 593 aaKnown RBP15.84■□□□□ 0.13
COL7A1-209ENST00000474432 Q96M85 177 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 KCTD14Q9BQ13 255 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-209ENST00000474432 FUZQ9BT04 418 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 ZNF416Q9BWM5 594 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 ANKRD19PQ9H560 264 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 CCNB1IP1Q9NPC3 277 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 NKIRAS2Q9NYR9 191 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 NDUFAF4Q9P032 175 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 EGFL7Q9UHF1 273 aa15.84■□□□□ 0.13
COL7A1-209ENST00000474432 GMNCA6NCL1 334 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 A6NIZ1 184 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 FAM157AC9JC47 383 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 NGFP01138 241 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 NR2C1P13056 603 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 DRD4P21917 467 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 MPV17P39210 176 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 GPR6P46095 362 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-209ENST00000474432 TMEM33P57088 247 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 FXYD6P3P58550 94 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 RAP1BP61224 184 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 RAP1AP62834 184 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 SRSF2Q01130 221 aaKnown RBP15.83■□□□□ 0.12
COL7A1-209ENST00000474432 KRTAP24-1Q3LI83 254 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 ZBED5Q49AG3 693 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 RFPL4BQ6ZWI9 263 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 FNDC8Q8TC99 324 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 FAM162AQ96A26 154 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 LRMDAQ9H2I8 198 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 KCNN2Q9H2S1 579 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 SLCO1C1Q9NYB5 712 aa15.83■□□□□ 0.12
COL7A1-209ENST00000474432 A0A1W2PRQ8 180 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 C5orf49A4QMS7 147 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 NDUFAB1O14561 156 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 IMPA2O14732 288 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 SNX3O60493 162 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 CD14P08571 375 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 CCNOP22674 350 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 PRDX6P30041 224 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 OMPP47874 163 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 MMP15P51511 669 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 LMO4P61968 165 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 CCL8P80075 99 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 DGCR6Q14129 220 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 SEC23BQ15437 767 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 SPATA46Q5T0L3 261 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 GLYATQ6IB77 296 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 ZNF774Q6NX45 483 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 THSD4Q6ZMP0 1018 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 TMEM158Q8WZ71 300 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 CMTM5Q96DZ9 223 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 FAM46AQ96IP4 442 aaKnown RBP15.82■□□□□ 0.12
COL7A1-209ENST00000474432 DHRS1Q96LJ7 313 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms