RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 FBXO9Q9UK97 447 aaPredicted RBP12.3□□□□□ -0.44
VAMP4-203ENST00000474047 C12orf71A8MTZ7 269 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 H7C417 338 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 KHDRBS3O75525 346 aaKnown RBP12.29□□□□□ -0.44
VAMP4-203ENST00000474047 RENP00797 406 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 CST1P01037 141 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 ERCC1P07992 297 aaPredicted RBP12.29□□□□□ -0.44
VAMP4-203ENST00000474047 CST2P09228 141 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 INHBBP09529 407 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF32P17041 273 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
VAMP4-203ENST00000474047 CCNOP22674 350 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 GSSP48637 474 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 PPP1R8Q12972 351 aaKnown RBP12.29□□□□□ -0.44
VAMP4-203ENST00000474047 BNIP1Q12981 228 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 PABPC1L2AQ5JQF8 200 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 OR9Q2Q8NGE9 314 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 CHID1Q9BWS9 393 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 SYT4Q9H2B2 425 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 YY1AP1Q9H869 796 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 TIMM10BQ9Y5J6 103 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 CELSR1Q9NYQ6 3014 aa12.29□□□□□ -0.44
VAMP4-203ENST00000474047 DHRS12A0PJE2 317 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 IMPA2O14732 288 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 CCL2P13500 99 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
VAMP4-203ENST00000474047 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
VAMP4-203ENST00000474047 FXYD6P3P58550 94 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 SWI5Q1ZZU3 235 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 MST1LQ2TV78 715 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF584Q8IVC4 421 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 AQP11Q8NBQ7 271 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 FOXN4Q96NZ1 517 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 RHNO1Q9BSD3 238 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 EIF3KQ9UBQ5 218 aaKnown RBP12.28□□□□□ -0.44
VAMP4-203ENST00000474047 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 GASTP01350 101 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 LCKP06239 509 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 MMP7P09237 267 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-203ENST00000474047 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 STOMP27105 288 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 CRABP1P29762 137 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 GLRXP35754 106 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 RAD52P43351 418 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 GDI2P50395 445 aaKnown RBP12.28□□□□□ -0.44
VAMP4-203ENST00000474047 EFNA4P52798 201 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 SELENOVP59797 346 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 TNK1Q13470 666 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 EFNB3Q15768 340 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 MICAQ29983 383 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 LEG1Q6P5S2 330 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 PGM2L1Q6PCE3 622 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 CLEC2AQ6UVW9 174 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 BIVMQ86UB2 503 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 GLB1L2Q8IW92 636 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 OR4C15Q8NGM1 316 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 AKR7LQ8NHP1 331 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 CANT1Q8WVQ1 401 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 RAB1BQ9H0U4 201 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 EMC7Q9NPA0 242 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 POLE4Q9NR33 117 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 POLR1DQ9Y2S0 133 aa12.28□□□□□ -0.44
VAMP4-203ENST00000474047 FAM171A2A8MVW0 826 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 GSC2O15499 205 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 IDH3BO43837 385 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 GPRIN2O60269 458 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 TXNDC12O95881 172 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 CTLA4P16410 223 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 GSTM3P21266 225 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 CDKN2AP42771 156 aaKnown RBP12.27□□□□□ -0.45
VAMP4-203ENST00000474047 DSCR9P59020 149 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 PSG4Q00888 419 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 CLEC12AQ5QGZ9 265 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 UNQ6126/PRO20091Q6UXV3 157 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF620Q6ZNG0 422 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 ADGRG5Q8IZF4 528 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 OR4K13Q8NH42 304 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF416Q9BWM5 594 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
VAMP4-203ENST00000474047 OR2H1Q9GZK4 316 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 NUAK2Q9H093 628 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 EGLN3Q9H6Z9 239 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 SRA1Q9HD15 236 aaKnown RBP12.27□□□□□ -0.45
VAMP4-203ENST00000474047 VSX1Q9NZR4 365 aaPredicted RBP12.27□□□□□ -0.45
VAMP4-203ENST00000474047 DUSP13Q9UII6 198 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 POMPQ9Y244 141 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 COA3Q9Y2R0 106 aaPredicted RBP12.27□□□□□ -0.45
VAMP4-203ENST00000474047 CDH10Q9Y6N8 788 aa12.27□□□□□ -0.45
VAMP4-203ENST00000474047 ARPC3O15145 178 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 E2F6O75461 281 aa12.26□□□□□ -0.45
VAMP4-203ENST00000474047 F12P00748 615 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-203ENST00000474047 HIST1H1CP16403 213 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms