RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 FHL1Q13642 323 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 INSL4Q14641 139 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 P2RY14Q15391 338 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM69Q5SWH9 247 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 EEF1A1P5Q5VTE0 462 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 IL20RBQ6UXL0 311 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 LINGO2Q7L985 606 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 FAM122BQ7Z309 247 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 KRT77Q7Z794 578 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 MARCH3Q86UD3 253 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 CDC20BQ86Y33 519 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 C9orf40Q8IXQ3 194 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 UBE2J2Q8N2K1 259 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ASCC1Q8N9N2 400 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 OR10H5Q8NGA6 315 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 OR8K3Q8NH51 312 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 NUBPLQ8TB37 319 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 STT3BQ8TCJ2 826 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 THEM6Q8WUY1 208 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF501Q96CX3 271 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ARSGQ96EG1 525 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 NEIL1Q96FI4 390 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 C5orf34Q96MH7 638 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ZFP3Q96NJ6 502 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 GNRHR2Q96P88 292 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 DERL3Q96Q80 235 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TSPAN32Q96QS1 320 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 OR2M2Q96R28 347 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 DCLRE1CQ96SD1 692 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SMAD5Q99717 465 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 CMKLR1Q99788 373 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 MARVELD1Q9BSK0 173 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TRAF4Q9BUZ4 470 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TTTY10Q9BZA0 68 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 VN1R1Q9GZP7 353 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TXNIPQ9H3M7 391 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SLA2Q9H6Q3 261 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 GPN1Q9HCN4 374 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 NOX4Q9NPH5 578 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 B3GAT2Q9NPZ5 323 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 DIABLOQ9NR28 239 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF275Q9NSD4 429 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TAS2R8Q9NYW2 309 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 KLRF1Q9NZS2 232 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 KLHL9Q9P2J3 617 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 FBXL4Q9UKA2 621 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 CLDN16Q9Y5I7 305 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 ALG5Q9Y673 324 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 SLCO1B1Q9Y6L6 691 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 MUC6Q6W4X9 2439 aa5.29□□□□□ -1.56
ATPAF1-204ENST00000474020 TMEM131Q92545 1883 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 TRBV11-1A0A0K0K1C0 115 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 A0A1B0GVI7 797 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 PRSS37A4D1T9 235 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 TRABD2BA6NFA1 517 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 OR2W5A6NFC9 320 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 FAM171A2A8MVW0 826 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 C9J4A7 227 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 C11orf98E9PRG8 122 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 GABARAPH6UMI1 98 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 GPR171O14626 319 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 TP53I11O14683 189 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF208O43345 1280 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 GMFGO60234 142 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC16A7O60669 478 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF254O75437 659 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ZFAND5O76080 213 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 MPIG6BO95866 241 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 IGHMP01871 453 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SPARCP09486 303 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 OR8G3PP0DMU2 310 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 TFPIP10646 304 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ANXA3P12429 323 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ARSBP15848 533 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 EPHA8P29322 1005 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC6A1P30531 599 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 CDKN2AP42771 156 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 DNASE1L1P49184 302 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 CCR9P51686 369 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 HCCSP53701 268 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 RAG2P55895 527 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 FBXW4P57775 412 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 OR10A3P58181 314 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 RAC3P60763 192 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 RRAS2P62070 204 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ADAM8P78325 824 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 CD83Q01151 205 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 CD300CQ08708 224 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SRSF5Q13243 272 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SNTB2Q13425 540 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SQSTM1Q13501 440 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 GPR176Q14439 515 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 CDK10Q15131 360 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 RAB11BQ15907 218 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 ACKR1Q16570 336 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 COL28A1Q2UY09 1125 aa5.28□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC25A35Q3KQZ1 300 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms