RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 H7C417 338 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 AHCYL1O43865 530 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 APEHP13798 732 aaKnown RBP16.34■□□□□ 0.21
PTCD3-210ENST00000473829 EFNB3Q15768 340 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 PABPC1L2AQ5JQF8 200 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 OTPQ5XKR4 325 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 ADCK1Q86TW2 530 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 SPATA24Q86W54 205 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 AQP11Q8NBQ7 271 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 CPEB3Q8NE35 698 aaKnown RBP16.34■□□□□ 0.21
PTCD3-210ENST00000473829 OR8D4Q8NGM9 314 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 AKR7LQ8NHP1 331 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 IFT27Q9BW83 186 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 PLA2G12AQ9BZM1 189 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 EMC7Q9NPA0 242 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 POLE4Q9NR33 117 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 CDH10Q9Y6N8 788 aa16.34■□□□□ 0.21
PTCD3-210ENST00000473829 RTTNQ86VV8 2226 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 H7C1Q1 480 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 DCTN6O00399 190 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 ARPC3O15145 178 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 SLC16A7O60669 478 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 CST1P01037 141 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 IGFBP1P08833 259 aaPredicted RBP16.33■□□□□ 0.2
PTCD3-210ENST00000473829 CST2P09228 141 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 HIST1H1CP16403 213 aaKnown RBP16.33■□□□□ 0.2
PTCD3-210ENST00000473829 MSR1P21757 451 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 APEX1P27695 318 aaKnown RBP16.33■□□□□ 0.2
PTCD3-210ENST00000473829 PSG4Q00888 419 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 MICAQ29983 383 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 TMEM179BQ7Z7N9 219 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 LINC00471Q8N535 108 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 SLCO4A1Q96BD0 722 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 TSSK2Q96PF2 358 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 ZNF416Q9BWM5 594 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 NUAK2Q9H093 628 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 WNT5BQ9H1J7 359 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 PLK3Q9H4B4 646 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 RERGLQ9H628 205 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 CCNB1IP1Q9NPC3 277 aa16.33■□□□□ 0.2
PTCD3-210ENST00000473829 TMEM129A0AVI4 362 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 MPZL1O95297 269 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 HSF2Q03933 536 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 CLEC12BQ2HXU8 276 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 CLEC12AQ5QGZ9 265 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 DNM1P46Q6ZS02 220 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 SVOPLQ8N434 492 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 OR4K13Q8NH42 304 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 COX4I2Q96KJ9 171 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 NMNAT3Q96T66 252 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 SMR3AQ99954 134 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 OR2H1Q9GZK4 316 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 KCNN2Q9H2S1 579 aa16.32■□□□□ 0.2
PTCD3-210ENST00000473829 COA3Q9Y2R0 106 aaPredicted RBP16.32■□□□□ 0.2
PTCD3-210ENST00000473829 IGLV1-36A0A0B4J1U3 117 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 B9A039 149 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 BHLHE40O14503 412 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 SSX4O60224 188 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 FKBP6O75344 327 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 KHDRBS3O75525 346 aaKnown RBP16.31■□□□□ 0.2
PTCD3-210ENST00000473829 LY6HO94772 140 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 SOX14O95416 240 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 SNAP29O95721 258 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 GPANK1O95872 356 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 TP53P04637 393 aaPredicted RBP16.31■□□□□ 0.2
PTCD3-210ENST00000473829 FAM157BP0CG42 384 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 SNRPD2P62316 118 aaKnown RBP16.31■□□□□ 0.2
PTCD3-210ENST00000473829 GALK2Q01415 458 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 PLP2Q04941 152 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 TNK1Q13470 666 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 LEG1Q6P5S2 330 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 RASSF6Q6ZTQ3 369 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 SDR9C7Q8NEX9 313 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 OR10G2Q8NGC3 310 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 C18orf12Q96KH6 178 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 SORCS2Q96PQ0 1159 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 NIPSNAP1Q9BPW8 284 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 DGCR6LQ9BY27 220 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 MRPL37Q9BZE1 423 aaKnown RBP16.31■□□□□ 0.2
PTCD3-210ENST00000473829 OR51B6Q9H340 312 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 C1orf198Q9H425 327 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 FN3KQ9H479 309 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 GSX1Q9H4S2 264 aaPredicted RBP16.31■□□□□ 0.2
PTCD3-210ENST00000473829 IL20Q9NYY1 176 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 MTORP42345 2549 aa16.31■□□□□ 0.2
PTCD3-210ENST00000473829 LOC100509620A0A075B734 347 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 IQCMA0A1B0GVH7 501 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 FOSL1P15407 271 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 GLRXP35754 106 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 RAB35Q15286 201 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 TBC1D28Q2M2D7 210 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 SLC35F1Q5T1Q4 408 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 ZNF774Q6NX45 483 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 JAZF1Q86VZ6 243 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 GLB1L2Q8IW92 636 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 HS3ST5Q8IZT8 346 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 PAPD5Q8NDF8 572 aaKnown RBP16.3■□□□□ 0.2
PTCD3-210ENST00000473829 MRPL24Q96A35 216 aaKnown RBP16.3■□□□□ 0.2
PTCD3-210ENST00000473829 POM121L2Q96KW2 1035 aa16.3■□□□□ 0.2
PTCD3-210ENST00000473829 DOK1Q99704 481 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms