RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ZIC3O60481 467 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ENTPD6O75354 484 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 PTP4A3O75365 173 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 CBR3O75828 277 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 TRAPPC6AO75865 159 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 IFNGP01579 166 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 MT-ND2P03891 347 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 HMGN1P05114 100 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 RFPL3SP0C7P2 107 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 GSTT2P0CG29 244 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 GSTT2BP0CG30 244 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ADORA3P0DMS8 318 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ZNF3P17036 446 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 MAGEA5P43359 124 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 OR2B6P58173 313 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 B3GALT5-AS1P59052 145 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 CTXN1P60606 82 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ERVK-25P63136 954 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 EGR3Q06889 387 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 FOXO1Q12778 655 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 PMS2P3Q13401 168 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 KRR1Q13601 381 aaKnown RBP5.65□□□□□ -1.5
HDAC1-205ENST00000472928 MFSD13AQ14CX5 517 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 TMEM44Q2T9K0 475 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 GLYR1Q49A26 553 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ALG10Q5BKT4 473 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 NIPAL3Q6P499 406 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 PRSS57Q6UWY2 283 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 DPY19L2P2Q6ZN68 376 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 BCDIN3DQ7Z5W3 292 aaKnown RBP5.65□□□□□ -1.5
HDAC1-205ENST00000472928 SLC22A16Q86VW1 577 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 LRRC75A-AS1Q8N1F1 130 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 FAM109AQ8N4B1 249 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ZNF540Q8NDQ6 660 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 SDR9C7Q8NEX9 313 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 BBS1Q8NFJ9 593 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 OR6S1Q8NH40 331 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 MFSD8Q8NHS3 518 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 LIPHQ8WWY8 451 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 RASD2Q96D21 266 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 Q96MT0 163 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 ZNF582Q96NG8 517 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-205ENST00000472928 GPX7Q96SL4 187 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-205ENST00000472928 COPS4Q9BT78 406 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 POTEKPQ9BYX7 375 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 CCDC90BQ9GZT6 254 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 FN3KQ9H479 309 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 MED20Q9H944 212 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 PALMDQ9NP74 551 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 CCNB1IP1Q9NPC3 277 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 HINT3Q9NQE9 182 aaKnown RBP5.65□□□□□ -1.5
HDAC1-205ENST00000472928 CMC2Q9NRP2 79 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 SCN3BQ9NY72 215 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 KLHL21Q9UJP4 597 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 TPRKBQ9Y3C4 175 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 IER3IP1Q9Y5U9 82 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 SNX5Q9Y5X3 404 aa5.65□□□□□ -1.5
HDAC1-205ENST00000472928 DSCAMO60469 2012 aa5.65□□□□□ -1.51
HDAC1-205ENST00000472928 PRR14LQ5THK1 2151 aa5.65□□□□□ -1.51
HDAC1-205ENST00000472928 A0A1W2PNV4 684 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 SH3D21A4FU49 640 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 EFCAB10A6NFE3 127 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 FAM183AA6NL82 134 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 GJE1A6NN92 205 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PTGES3LE9PB15 166 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PRR23D1E9PI22 279 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF701M0R085 212 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PLPP3O14495 311 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 TNFSF11O14788 317 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 SEC14L5O43304 696 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 RGS10O43665 173 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 EFNA2O43921 213 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 FZD7O75084 574 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 AKR7A3O95154 331 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 OR6A2O95222 327 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 GOSR1O95249 250 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 FADS2O95864 444 aaKnown RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PLGP00747 810 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 CD14P08571 375 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 HTR1AP08908 422 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 TSPAN19P0C672 248 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PRR23D2P0DMB1 279 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 DBTP11182 482 aaKnown RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 HIST1H1CP16403 213 aaKnown RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 CPEP16870 476 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 BMP5P22003 454 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PAICSP22234 425 aaKnown RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 SDHAP31040 664 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 CEACAM8P31997 349 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 BCAP31P51572 246 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 MAP2K6P52564 334 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 CDH11P55287 796 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 CXCR4P61073 352 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 RPS7P62081 194 aaKnown RBP5.64□□□□□ -1.51
HDAC1-205ENST00000472928 TUBA4AP68366 448 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 SLC35A2P78381 396 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 SORDQ00796 357 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 PIGFQ07326 219 aa5.64□□□□□ -1.51
HDAC1-205ENST00000472928 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms