RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 TRIP10Q15642 601 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 SNAPC1Q16533 368 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 FBXW10Q5XX13 1052 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 C12orf73Q69YU5 71 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 PIK3IP1Q96FE7 263 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 TSSK2Q96PF2 358 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 SH3GL3Q99963 347 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 TMEM204Q9BSN7 226 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 CCNB1IP1Q9NPC3 277 aa17.41■□□□□ 0.38
SF1-213ENST00000472725 UTP20O75691 2785 aaKnown RBP17.41■□□□□ 0.38
SF1-213ENST00000472725 DPRXA6NFQ7 191 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 M0R1B8 84 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 PRODHO43272 600 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 MMP7P09237 267 aaPredicted RBP17.4■□□□□ 0.38
SF1-213ENST00000472725 GAAP10253 952 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 BSPH1Q075Z2 132 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 TMEM236Q5W0B7 351 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 ALKBH2Q6NS38 261 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 MDP1Q86V88 176 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 LRRC18Q8N456 261 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 PROKR2Q8NFJ6 384 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 SLC26A10Q8NG04 563 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 ZNF75AQ96N20 296 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 SLC29A1Q99808 456 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 GRIP2Q9C0E4 1043 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 CLEC4MQ9H2X3 399 aaPredicted RBP17.4■□□□□ 0.38
SF1-213ENST00000472725 RIBC2Q9H4K1 309 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 RNF121Q9H920 327 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 RNPEPL1Q9HAU8 725 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 TVP23BQ9NYZ1 205 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 RNF115Q9Y4L5 304 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 TIMM10BQ9Y5J6 103 aa17.4■□□□□ 0.38
SF1-213ENST00000472725 IGHV1-18A0A0C4DH31 117 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 ZNF503-AS2A6NEH8 195 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 SERPINA5P05154 406 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 ZNF14P17017 642 aaPredicted RBP17.39■□□□□ 0.37
SF1-213ENST00000472725 SPI1P17947 270 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 EPHA2P29317 976 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 TUBA1BP68363 451 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 TUBA4AP68366 448 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 EFNB1P98172 346 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 PLP2Q04941 152 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 SLC34A1Q06495 639 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 SCRN3Q0VDG4 424 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 AQP6Q13520 282 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 RIPK1Q13546 671 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 ENDOGQ14249 297 aaKnown RBP17.39■□□□□ 0.37
SF1-213ENST00000472725 SLC35D3Q5M8T2 416 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 ADAM5Q6NVV9 412 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 TUBA1AQ71U36 451 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 DEPDC4Q8N2C3 294 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 PTP4A1Q93096 173 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 HRASLS5Q96KN8 279 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 ZNF416Q9BWM5 594 aa17.39■□□□□ 0.37
SF1-213ENST00000472725 HEATR1Q9H583 2144 aaKnown RBP17.38■□□□□ 0.37
SF1-213ENST00000472725 E9PQ18 207 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 CRYAAP02489 173 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 FMO3P31513 532 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 CDC42P60953 191 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 TEKQ02763 1124 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 PIGFQ07326 219 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 OGFRL1Q5TC84 451 aaPredicted RBP17.38■□□□□ 0.37
SF1-213ENST00000472725 TMEM200AQ86VY9 491 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 ALDH16A1Q8IZ83 802 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 OR10H5Q8NGA6 315 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 TRUB1Q8WWH5 349 aaKnown RBP17.38■□□□□ 0.37
SF1-213ENST00000472725 C11orf40Q8WZ69 217 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 FBXO17Q96EF6 278 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 KCNS3Q9BQ31 491 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 C1QTNF6Q9BXI9 259 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 VCXQ9H320 206 aa17.38■□□□□ 0.37
SF1-213ENST00000472725 IQCMA0A1B0GVH7 501 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 ABCD4O14678 606 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 GLCEO94923 617 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 HLA-DQA2P01906 255 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 CECR9P0C854 216 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 ZNF823P16415 610 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 ZNF32P17041 273 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 POLR2IP36954 125 aaKnown RBP17.37■□□□□ 0.37
SF1-213ENST00000472725 IDH3GP51553 393 aaPredicted RBP17.37■□□□□ 0.37
SF1-213ENST00000472725 PLBD1Q6P4A8 553 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 CXXC5Q7LFL8 322 aaKnown RBP17.37■□□□□ 0.37
SF1-213ENST00000472725 CPOQ8IVL8 374 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 OR8J1Q8NGP2 316 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 OR9Q1Q8NGQ5 310 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 OR1J2Q8NGS2 313 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 FGFBP3Q8TAT2 258 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 TMEM163Q8TC26 289 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 TOR3AQ9H497 397 aa17.37■□□□□ 0.37
SF1-213ENST00000472725 HINT3Q9NQE9 182 aaKnown RBP17.37■□□□□ 0.37
SF1-213ENST00000472725 SMPD3Q9NY59 655 aaPredicted RBP17.37■□□□□ 0.37
SF1-213ENST00000472725 HECTD1Q9ULT8 2610 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 FAM183AA6NL82 134 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 TMCC2O75069 709 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 TFP02787 698 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 SCG5P05408 212 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 COX5BP10606 129 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 PEX2P28328 305 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 PYCR1P32322 319 aa17.36■□□□□ 0.37
SF1-213ENST00000472725 GGT2P36268 569 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms