RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SLC38A2Q96QD8 506 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 WACQ9BTA9 647 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 POLE4Q9NR33 117 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 B9D1Q9UPM9 204 aa13.03□□□□□ -0.32
CDC42SE1-203ENST00000470278 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 A0A1W2PPL8 197 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 A0A1W2PR80 420 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 E9PQ18 207 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 H0YHG0 523 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 CTAG2O75638 210 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 IGLV1-44P01699 117 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 GAAP10253 952 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 LOXP28300 417 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 LAP3P28838 519 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 EPHA2P29317 976 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 CDAP32320 146 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 ARR3P36575 388 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 GUCA1AP43080 201 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 TLE4Q04727 773 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 TRIP10Q15642 601 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 ETFDHQ16134 617 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 KCNMB1Q16558 191 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 GSG1Q2KHT4 349 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 C12orf73Q69YU5 71 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 SLC16A14Q7RTX9 510 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 SKA3Q8IX90 412 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 SLC29A1Q99808 456 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 FN3KQ9H479 309 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 ESRP2Q9H6T0 727 aaKnown RBP13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 RNPEPL1Q9HAU8 725 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 FBXL3Q9UKT7 428 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 DNHD1Q96M86 4753 aa13.02□□□□□ -0.33
CDC42SE1-203ENST00000470278 PRR14LQ5THK1 2151 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 HLA-HP01893 362 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 CST2P09228 141 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 MMP7P09237 267 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 CBR1P16152 277 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 PTAFRP25105 342 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 PEX2P28328 305 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 CENPAP49450 140 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 LSM6P62312 80 aaKnown RBP13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 NCMAPQ5T1S8 102 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 OGFRL1Q5TC84 451 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 TMEM236Q5W0B7 351 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 SYT9Q86SS6 491 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 MDP1Q86V88 176 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 ZNF75AQ96N20 296 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 SH3GL3Q99963 347 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 RIBC2Q9H4K1 309 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 SEC61A2Q9H9S3 476 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 NOX3Q9HBY0 568 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 COA3Q9Y2R0 106 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-203ENST00000470278 PRODHO43272 600 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 ZNF14P17017 642 aaPredicted RBP13□□□□□ -0.33
CDC42SE1-203ENST00000470278 SPI1P17947 270 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 CAPZA2P47755 286 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 ZNF83P51522 516 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 BLVRAP53004 296 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 PCBD1P61457 104 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 TUBA1BP68363 451 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 TUBA4AP68366 448 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 EFNB1P98172 346 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 SLC34A1Q06495 639 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 BSPH1Q075Z2 132 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 RIPK1Q13546 671 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 ENDOGQ14249 297 aaKnown RBP13□□□□□ -0.33
CDC42SE1-203ENST00000470278 SGCAQ16586 387 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 TUBA1AQ71U36 451 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 NRGNQ92686 78 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 HTRA1Q92743 480 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 PLPPR2Q96GM1 343 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 PLEKHA8Q96JA3 519 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 HRASLS5Q96KN8 279 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 MBOAT4Q96T53 435 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 ZNF416Q9BWM5 594 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 KCNN2Q9H2S1 579 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 SRA1Q9HD15 236 aaKnown RBP13□□□□□ -0.33
CDC42SE1-203ENST00000470278 MOKQ9UQ07 419 aa13□□□□□ -0.33
CDC42SE1-203ENST00000470278 IGHV1-18A0A0C4DH31 117 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 DPRXA6NFQ7 191 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 FAM183AA6NL82 134 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 C12orf71A8MTZ7 269 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 PRR23D1E9PI22 279 aaPredicted RBP12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 RAB36O95755 333 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 SCG5P05408 212 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 PRR23D2P0DMB1 279 aaPredicted RBP12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 CD79AP11912 226 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 CD40P25942 277 aa12.99□□□□□ -0.33
CDC42SE1-203ENST00000470278 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms