RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CDAP32320 146 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 ZNF84P51523 738 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 ERVK-25P63136 954 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 NAAAQ02083 359 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 SEC23BQ15437 767 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 SPNS3Q6ZMD2 512 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 LINC00299Q6ZSB3 139 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 USP51Q70EK9 711 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 THAP5Q7Z6K1 395 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 TGIF2LYQ8IUE0 185 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 FBXL14Q8N1E6 418 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 LRRC18Q8N456 261 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 OR4K5Q8NGD3 323 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 OR5K1Q8NHB7 308 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 FGFBP3Q8TAT2 258 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 MAGEE2Q8TD90 523 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 LIPHQ8WWY8 451 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 PPP1R14BQ96C90 147 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 FBXO17Q96EF6 278 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 Q96MF0 132 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 FOXN4Q96NZ1 517 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 TSPAN32Q96QS1 320 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 SLC29A1Q99808 456 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 KATNB1Q9BVA0 655 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 TXNIPQ9H3M7 391 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 ANKRD19PQ9H560 264 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 RNF121Q9H920 327 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 KRCC1Q9NPI7 259 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 FAIMQ9NVQ4 179 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 GDF2Q9UK05 429 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 TMEM5Q9Y2B1 443 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 USF3Q68DE3 2245 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 ARID1AO14497 2285 aa8.47□□□□□ -1.05
RTFDC1-205ENST00000466260 ZNF469Q96JG9 3925 aaPredicted RBP8.46□□□□□ -1.05
RTFDC1-205ENST00000466260 VPS13CQ709C8 3753 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 SMAD7O15105 426 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 ARHGEF9O43307 516 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 FARS2O95363 451 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 CST1P01037 141 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 IGF2P01344 180 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 CBR1P16152 277 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 JUNBP17275 347 aaPredicted RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 ARR3P36575 388 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 GIPRP48546 466 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 RPL27P61353 136 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 RAB1AP62820 205 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 ADARB1P78563 741 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 DCTN2Q13561 401 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 RAB39AQ14964 217 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 SGCAQ16586 387 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 ARMC4Q5T2S8 1044 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 AGAP6Q5VW22 663 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 LRFN4Q6PJG9 635 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 ZNF773Q6PK81 442 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 SLC16A14Q7RTX9 510 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 HDDC2Q7Z4H3 204 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 SKA3Q8IX90 412 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 RNF113BQ8IZP6 322 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 MUC15Q8N387 334 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 SLC22A24Q8N4F4 322 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 LRRC75AQ8NAA5 344 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 FANK1Q8TC84 345 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 RASD2Q96D21 266 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 Q96M85 177 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 DHRS9Q9BPW9 319 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 TRAF4Q9BUZ4 470 aaPredicted RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 CACNG6Q9BXT2 260 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 OR51B6Q9H340 312 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 RERGLQ9H628 205 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 CCNB1IP1Q9NPC3 277 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 TMEM38BQ9NVV0 291 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 TMCC3Q9ULS5 477 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 SNX5Q9Y5X3 404 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 TACC2O95359 2948 aa8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 CHD3Q12873 2000 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-205ENST00000466260 TEX13CA0A0J9YWL9 993 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 A0A1W2PRQ8 180 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 SH3PXD2BA1X283 911 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 TRIM64BA6NI03 449 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 E2F6O75461 281 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 UBL3O95164 117 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 PPP1R3DO95685 299 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 IGKV3-15P01624 115 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 CD8AP01732 235 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 IGHMP01871 453 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 ALPLP05186 524 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 TSPAN19P0C672 248 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 CCDC159P0C7I6 412 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 OR8G3PP0DMU2 310 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 OMPP47874 163 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 LIMS1P48059 325 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 TMBIM6P55061 237 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 SNTB2Q13425 540 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 FHL1Q13642 323 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 DGCR6Q14129 220 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 IQCCQ4KMZ1 466 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 SHEQ5VZ18 495 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms