RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 LIPCP11150 499 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 FKBP2P26885 142 aaKnown RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 P2RY4P51582 365 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 BIDP55957 195 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 NANOS3P60323 173 aaKnown RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 EGR3Q06889 387 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 ATP1A1-AS1Q5TC04 95 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 DNM1P34Q6PK57 102 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 IGF2-ASQ6U949 168 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 PAMR1Q6UXH9 720 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 NOXA1Q86UR1 476 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 NR2C2APQ86WQ0 139 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 UEVLDQ8IX04 471 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 KCNK17Q96T54 332 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 AMELYQ99218 206 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 SMAD5Q99717 465 aaKnown RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 RNF121Q9H920 327 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 FANCFQ9NPI8 374 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 PRELID1Q9Y255 219 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 COA3Q9Y2R0 106 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 ZIC3O60481 467 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 F10P00742 488 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 CYB561P49447 251 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 RPS11P62280 158 aaKnown RBP eCLIP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 PPP3R1P63098 170 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 OC90Q02509 493 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 AIMP2Q13155 320 aaKnown RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 MEP1BQ16820 701 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 LIPNQ5VXI9 398 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 VASH2Q86V25 355 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF227Q86WZ6 799 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 TEX19Q8NA77 164 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 HSD17B8Q92506 261 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 FER1L6-AS2Q96M78 137 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 EMC6Q9BV81 110 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 SLCO1C1Q9NYB5 712 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 TEKT2Q9UIF3 430 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 ZFHX4Q86UP3 3567 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 A0A1W2PPK0 400 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF814B7Z6K7 855 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 SULT2B1O00204 365 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 PLA2G10O15496 165 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 CBR3O75828 277 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 KIR2DL3P43628 341 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 ADAM8P78325 824 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 SLC35A1P78382 337 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 GLO1Q04760 184 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 MRPL28Q13084 256 aaKnown RBP12.93□□□□□ -0.34
HDAC6-213ENST00000462730 IDNKQ5T6J7 187 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 SLC18B1Q6NT16 456 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 MZT2AQ6P582 158 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 TPRA1Q86W33 373 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 ENKURQ8TC29 256 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 MIB2Q96AX9 1013 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 OR14A2Q96R54 314 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 STMN3Q9NZ72 180 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF281Q9Y2X9 895 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 FAM186AA6NE01 2351 aa12.93□□□□□ -0.34
HDAC6-213ENST00000462730 KHDRBS3O75525 346 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 KLK2P20151 261 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 M6PRP20645 277 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 CFL1P23528 166 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 OR10A3P58181 314 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ALKBH1Q13686 389 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 TOMM20Q15388 145 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 HBMQ6B0K9 141 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 NHLRC1Q6VVB1 395 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 TMPPEQ6ZT21 453 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 GPAT4Q86UL3 456 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 UBE2J2Q8N2K1 259 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 HAVCR2Q8TDQ0 301 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ASB17Q8WXJ9 295 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 NSMAFQ92636 917 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 BEX2Q9BXY8 128 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 CEP250Q9BV73 2442 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 A0A087WV48 116 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 IGKV1D-43A0A0B4J1Z2 117 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 AQP7P3A6NL99 342 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 HPGDSO60760 199 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ARL6IP5O75915 188 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ZFPL1O95159 310 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 MPZL1O95297 269 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 UCHL1P09936 223 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF17P17021 662 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 ERP29P30040 261 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 PTGS2P35354 604 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 GPR85P60893 370 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 CD83Q01151 205 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 EIF2B1Q14232 305 aaKnown RBP12.92□□□□□ -0.34
HDAC6-213ENST00000462730 YIF1BQ5BJH7 314 aa12.92□□□□□ -0.34
HDAC6-213ENST00000462730 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms