RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TIMD4Q96H15 378 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 ERMAPQ96PL5 475 aaPredicted RBP7.75□□□□□ -1.17
DDX39B-216ENST00000462421 TSPAN32Q96QS1 320 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 SYT3Q9BQG1 590 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 EGLN1Q9GZT9 426 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 GSX1Q9H4S2 264 aaPredicted RBP7.75□□□□□ -1.17
DDX39B-216ENST00000462421 MAGIXQ9H6Y5 334 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 DLL4Q9NR61 685 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 CYSLTR2Q9NS75 346 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 NDUFAF4Q9P032 175 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 ACTR3BQ9P1U1 418 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 KCNS2Q9ULS6 477 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
DDX39B-216ENST00000462421 PDZD2O15018 2839 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 CSMD2Q7Z408 3487 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 IDH3BO43837 385 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 TIMM8AO60220 97 aaPredicted RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 DOK2O60496 412 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 SLC16A7O60669 478 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 DIRAS1O95057 198 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 SNAP29O95721 258 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 ZNF823P16415 610 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 FPR3P25089 353 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 CDAP32320 146 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 CDH15P55291 814 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 FMODQ06828 376 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 SCGB2A2Q13296 93 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 AQP6Q13520 282 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 GK3PQ14409 553 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 ARMC4Q5T2S8 1044 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 LRFN4Q6PJG9 635 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 SYT9Q86SS6 491 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 MEX3DQ86XN8 651 aaKnown RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 OR4C15Q8NGM1 316 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 ABHD4Q8TB40 342 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 IPCEF1Q8WWN9 437 aaPredicted RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 HTRA1Q92743 480 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 HDAC2Q92769 488 aaKnown RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 KCNK17Q96T54 332 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 ZNF416Q9BWM5 594 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 RSPO3Q9BXY4 272 aaPredicted RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 MRPL13Q9BYD1 178 aaKnown RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 TPK1Q9H3S4 243 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 TBC1D23Q9NUY8 699 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 B3GNT2Q9NY97 397 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 PLEK2Q9NYT0 353 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 TAAR3PQ9P1P4 343 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 KIF17Q9P2E2 1029 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 LPAR3Q9UBY5 353 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 CGGBP1Q9UFW8 167 aaPredicted RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 SAMHD1Q9Y3Z3 626 aaKnown RBP7.74□□□□□ -1.17
DDX39B-216ENST00000462421 IER3IP1Q9Y5U9 82 aa7.74□□□□□ -1.17
DDX39B-216ENST00000462421 F8P00451 2351 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TRBV4-1A0A0J9YWV2 114 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 A8MV72 311 aaPredicted RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 H3BSA7 217 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 H7C1C5 153 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 IMPA2O14732 288 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 SGCEO43556 437 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 PATE4P0C8F1 98 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 RAP2AP10114 183 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 ZNF35P13682 527 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 ZNF32P17041 273 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 PAICSP22234 425 aaKnown RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TUBG1P23258 451 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 APEX1P27695 318 aaKnown RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 LAP3P28838 519 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 MSX2P35548 267 aaPredicted RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 GPR6P46095 362 aaPredicted RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 RGS6P49758 472 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 UCP2P55851 309 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 LCN6P62502 163 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 LSM11P83369 360 aaKnown RBP eCLIP7.73□□□□□ -1.172e-10■□□□□ 9.9
DDX39B-216ENST00000462421 RUNX1T1Q06455 604 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 SLC3A1Q07837 685 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TRIM25Q14258 630 aaKnown RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TAF13Q15543 124 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 HIST3H3Q16695 136 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 CHRFAM7AQ494W8 412 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 FAM27BQ5VT28 67 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 FAM166AQ6J272 317 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 LEG1Q6P5S2 330 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TRPM8Q7Z2W7 1104 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TSPYL5Q86VY4 417 aaPredicted RBP7.73□□□□□ -1.17
DDX39B-216ENST00000462421 KRTAP1-3Q8IUG1 177 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TEX29Q8N6K0 151 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 FITM2Q8N6M3 262 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 PROKR2Q8NFJ6 384 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 TEX47Q8TBZ9 253 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 C10orf105Q8TEF2 133 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 IGFBPL1Q8WX77 278 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 RASD2Q96D21 266 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 ASB9Q96DX5 294 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 PLEKHA8Q96JA3 519 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 SORCS2Q96PQ0 1159 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 DIRC2Q96SL1 478 aa7.73□□□□□ -1.17
DDX39B-216ENST00000462421 SMR3AQ99954 134 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms