RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 GJC3Q8NFK1 279 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 OR1J2Q8NGS2 313 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 NMD3Q96D46 503 aaKnown RBP9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 KCNS3Q9BQ31 491 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 NMNAT2Q9BZQ4 307 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 BLOC1S6Q9UL45 172 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 COA3Q9Y2R0 106 aaPredicted RBP9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 RPL36Q9Y3U8 105 aaKnown RBP9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 TIMM10BQ9Y5J6 103 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
SMNDC1-203ENST00000460483 BSNQ9UPA5 3926 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 NCKAP5O14513 1909 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 NKX2-6A6NCS4 301 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 VSTM5A8MXK1 200 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 PRKYO43930 277 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 APOC1P02654 83 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ITGA5P08648 1049 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 CTLA4P16410 223 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 EPHA2P29317 976 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 HTR1FP30939 366 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 KIR2DL3P43628 341 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 SLC15A1P46059 708 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 NUDT6P53370 316 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 NR1H2P55055 460 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 AQP4P55087 323 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ACTC1P68032 377 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ACTA1P68133 377 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ADAM8P78325 824 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ADARB1P78563 741 aaKnown RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 FMODQ06828 376 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 FAM27E3Q08E93 113 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ECH1Q13011 328 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 PPA1Q15181 289 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 KCNMB1Q16558 191 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 GSG1Q2KHT4 349 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 C3orf36Q3SXR2 165 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 TBRG1Q3YBR2 411 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 KLHL22Q53GT1 634 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 TEX30Q5JUR7 227 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ZNF362Q5T0B9 420 aaPredicted RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 C9orf135Q5VTT2 229 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ANKRD34AQ69YU3 496 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 KCTD18Q6PI47 426 aaPredicted RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 TMEM108Q6UXF1 575 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 FOXL2NBQ6ZUU3 175 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 RHOUQ7L0Q8 258 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 RHOXF1Q8NHV9 184 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 FAM222BQ8WU58 562 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 NRG4Q8WWG1 115 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 PTP4A1Q93096 173 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 RADILQ96JH8 1075 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 INTS14Q96SY0 518 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 TEAD3Q99594 435 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ESRP2Q9H6T0 727 aaKnown RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 HINT3Q9NQE9 182 aaKnown RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 POLE4Q9NR33 117 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 SLC17A5Q9NRA2 495 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 SCN3BQ9NY72 215 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 HAO2Q9NYQ3 351 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 PRRC2CQ9Y520 2896 aaKnown RBP9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 ZNF407Q9C0G0 2248 aa9.67□□□□□ -0.86
SMNDC1-203ENST00000460483 POLEQ07864 2286 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 IGLV1-36A0A0B4J1U3 117 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 FAM183AA6NL82 134 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 PRSS44E7EML9 344 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 FADS2O95864 444 aaKnown RBP9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 CD79AP11912 226 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 B4GALT1P15291 398 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 MTNR1AP48039 350 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 ENTPD1P49961 510 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 CXCR4P61073 352 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 EFNB1P98172 346 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 APOFQ13790 326 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 AADACL4Q5VUY2 407 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 EGFL6Q8IUX8 553 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 C1orf174Q8IYL3 243 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 SLC26A10Q8NG04 563 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 OR9Q1Q8NGQ5 310 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 ASB17Q8WXJ9 295 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 BCL2L2Q92843 193 aaPredicted RBP9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 S100PBPQ96BU1 408 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 CNN2Q99439 309 aaKnown RBP9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 DDOQ99489 341 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 ANKRD60Q9BZ19 345 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 YIPF3Q9GZM5 350 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 SP140LQ9H930 580 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 RASSF1Q9NS23 344 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 CHCHD3Q9NX63 227 aaKnown RBP9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 ATPIF1Q9UII2 106 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 SPEF1Q9Y4P9 236 aa9.66□□□□□ -0.86
SMNDC1-203ENST00000460483 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 A0A096LPE4 126 aa9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 CLEC18AA5D8T8 446 aa9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 ZNF593O00488 134 aaPredicted RBP9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 EPXP11678 715 aa9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 CBR1P16152 277 aa9.65□□□□□ -0.86
SMNDC1-203ENST00000460483 PTAFRP25105 342 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms