RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PLPP4Q5VZY2 271 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CHCHD4Q8N4Q1 142 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PLPP7Q8NBV4 271 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 OR10D4PQ8NGN7 298 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SYNPRQ8TBG9 265 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MR1Q95460 341 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 LMLNQ96KR4 655 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SEPT5Q99719 369 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 FNDC11Q9BVV2 318 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 WDR76Q9H967 626 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MYNNQ9NPC7 610 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PARPBPQ9NWS1 579 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 KLHL28Q9NXS3 571 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MRM2Q9UI43 246 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC7A7Q9UM01 511 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC35A3Q9Y2D2 325 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 OBSL1O75147 1896 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 WNK1Q9H4A3 2382 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TRBV6-7A0A0A0MS04 114 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TOX3O15405 576 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 FLRT2O43155 660 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 NUPR1O60356 82 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CA11O75493 328 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GLCEO94923 617 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 ERCC1P07992 297 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HOXB5P09067 269 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PGA3P0DJD8 388 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GZMBP10144 247 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HOXA5P20719 270 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GALP22466 123 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TPRG1Q6ZUI0 275 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GAREM2Q75VX8 874 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MEPCEQ7L2J0 689 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 BAP18Q8IXM2 172 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 ZSCAN1Q8NBB4 408 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2A12Q8NGT7 310 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PTCHD1Q96NR3 888 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SPACA5Q96QH8 159 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PFDN5Q99471 154 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MCHR1Q99705 422 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPL37Q9BZE1 423 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 IL21Q9HBE4 155 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 BCL2L10Q9HD36 194 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 LPAR3Q9UBY5 353 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SRPK3Q9UPE1 567 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 B9D1Q9UPM9 204 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RNF115Q9Y4L5 304 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TRAV18A0A075B6X5 111 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 IGKV1D-8A0A087WSZ0 117 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 C5orf63A6NC05 138 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GGT3PA6NGU5 568 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 A8MWP6 167 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 H7C1C5 153 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RAB27BO00194 218 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GATCO43716 136 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC19A2O60779 497 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 C1GALT1C1LP0DN25 315 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 NR2F1P10589 423 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 ATP1B2P14415 290 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HPGDP15428 266 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 NDUFV2P19404 249 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RAB5AP20339 215 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 EIF2S3P41091 472 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 LCN6P62502 163 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PJVKQ0ZLH3 352 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TNFAIP1Q13829 316 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TRAM1Q15629 374 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 ANKRD39Q53RE8 183 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 BTNL8Q6UX41 500 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HEPN1Q6WQI6 88 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 DGAT2L6Q6ZPD8 337 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 LUZP2Q86TE4 346 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MYPOPQ86VE0 399 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SLITRK4Q8IW52 837 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CRIPAKQ8N1N5 446 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 OR4C3Q8NH37 302 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RNASE8Q8TDE3 154 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 GPX8Q8TED1 209 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CLP1Q92989 425 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PIGMQ9H3S5 423 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 WASF3Q9UPY6 502 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RNF114Q9Y508 228 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 DMRT1Q9Y5R6 373 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SPTBN4Q9H254 2564 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CCDC187A0A096LP49 1063 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TRAV1-2A0A0B4J238 106 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TVP23AA6NH52 213 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 F5H5T6 163 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RPP14O95059 124 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 MAS1P04201 325 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 FOLR2P14207 255 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 KLK2P20151 261 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PPP2R1BP30154 601 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PCP4P48539 62 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 HSD11B2P80365 405 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 SMAD3P84022 425 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RIPPLY1Q0D2K3 151 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 LMAN2Q12907 356 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 FOXF1Q12946 379 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms