RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 OR5H1A6NKK0 313 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 FAM183AA6NL82 134 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 SLC16A7O60669 478 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 THBDP07204 575 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 RPSAP08865 295 aaKnown RBP11.41□□□□□ -0.58
VPS33A-202ENST00000451053 CRHBPP24387 322 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 CRABP1P29762 137 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 HTR1FP30939 366 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 CDAP32320 146 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF84P51523 738 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 BLVRAP53004 296 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 TAB1Q15750 504 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 TBRG1Q3YBR2 411 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 SP5Q6BEB4 398 aaPredicted RBP11.41□□□□□ -0.58
VPS33A-202ENST00000451053 OR7E24Q6IFN5 339 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 LAIR2Q6ISS4 152 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 ANKRD16Q6P6B7 361 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF813Q6ZN06 617 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 MEPCEQ7L2J0 689 aaKnown RBP11.41□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF627Q7L945 461 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 WDR31Q8NA23 367 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 OR9Q1Q8NGQ5 310 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 OR52N5Q8NH56 324 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 MYDGFQ969H8 173 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 BOD1Q96IK1 185 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 FOXN4Q96NZ1 517 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 MED18Q9BUE0 208 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 NMNAT2Q9BZQ4 307 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 NUAK2Q9H093 628 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 OR10A4Q9H209 315 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 RERGLQ9H628 205 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 SLC17A5Q9NRA2 495 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 CNOT2Q9NZN8 540 aaKnown RBP11.41□□□□□ -0.58
VPS33A-202ENST00000451053 CRIM1Q9NZV1 1036 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 MOKQ9UQ07 419 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 FKBP7Q9Y680 259 aa11.41□□□□□ -0.58
VPS33A-202ENST00000451053 GCN1Q92616 2671 aaKnown RBP11.41□□□□□ -0.58
VPS33A-202ENST00000451053 IGLV1-36A0A0B4J1U3 117 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 A0A1W2PPL8 197 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 MRPS14O60783 128 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 LYNP07948 512 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 DBTP11182 482 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 PPP3CBP16298 524 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 SPI1P17947 270 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 EEF1B2P24534 225 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 PEX19P40855 299 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 KIR2DL3P43628 341 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 MTNR1AP48039 350 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 NUDT6P53370 316 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 RPS7P62081 194 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 TUBA1BP68363 451 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 TUBA4AP68366 448 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF91Q05481 1191 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 POU4F2Q12837 409 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 APOFQ13790 326 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 SMN1Q16637 294 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 KLHL12Q53G59 568 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 KLHL22Q53GT1 634 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 TIMM23BQ5SRD1 257 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 HIST2H2BCQ6DN03 193 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 ALKBH2Q6NS38 261 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 FOXL2NBQ6ZUU3 175 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 TUBA1AQ71U36 451 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 OR6V1Q8N148 313 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 C17orf78Q8N4C9 275 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF540Q8NDQ6 660 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 NABP1Q96AH0 204 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 SPOCK3Q9BQ16 436 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 HCAR1Q9BXC0 346 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 OR51V1Q9H2C8 321 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 MED20Q9H944 212 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 SRA1Q9HD15 236 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 AASSQ9UDR5 926 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 NDRG3Q9UGV2 375 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 PSORS1C1Q9UIG5 152 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 B9D1Q9UPM9 204 aa11.4□□□□□ -0.58
VPS33A-202ENST00000451053 COA3Q9Y2R0 106 aaPredicted RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 SPTBN1Q01082 2364 aaKnown RBP11.4□□□□□ -0.58
VPS33A-202ENST00000451053 ZNF503-AS2A6NEH8 195 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 FAM171A2A8MVW0 826 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 XPNPEP2O43895 674 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 KHDRBS3O75525 346 aaKnown RBP11.39□□□□□ -0.59
VPS33A-202ENST00000451053 GPANK1O95872 356 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SCG5P05408 212 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 COX6B1P14854 86 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SLC2A5P22732 501 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 HOXC12P31275 282 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 PYCR1P32322 319 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 ATP6V1E1P36543 226 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 MRPS34P82930 218 aaKnown RBP11.39□□□□□ -0.59
VPS33A-202ENST00000451053 RAB40BQ12829 278 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 PPA1Q15181 289 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SGCAQ16586 387 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 OTPQ5XKR4 325 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SEZ6L2Q6UXD5 910 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 ZBTB46Q86UZ6 589 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 WFDC8Q8IUA0 241 aa11.39□□□□□ -0.59
VPS33A-202ENST00000451053 SKA3Q8IX90 412 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms