RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 CD8AP01732 235 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 COL9A1P20849 921 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 ABHD17CQ6PCB6 329 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 STEAP2Q8NFT2 490 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 ETV7Q9Y603 341 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 PRICKLE3O43900 615 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 F3P13726 295 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 DAOP14920 347 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 CRABP1P29762 137 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 IGFALSP35858 605 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 MC3RP41968 323 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 CAV2P51636 162 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 TNFRSF9Q07011 255 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 DUSP8Q13202 625 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 PCGF3Q3KNV8 242 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 CACUL1Q86Y37 369 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 COX18Q8N8Q8 333 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 GAL3ST3Q96A11 431 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 INSM2Q96T92 566 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 AICDAQ9GZX7 198 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 TWSG1Q9GZX9 223 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 OPN3Q9H1Y3 402 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 BCO1Q9HAY6 547 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 GDF2Q9UK05 429 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 ZC3H12DA2A288 527 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 IDSB3KWA1 339 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 AIFM1O95831 613 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 SLC25A4P12235 298 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 TPT1P13693 172 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 GSK3AP49840 483 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 SSPNQ14714 243 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 ZNHIT3Q15649 155 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 ZNF776Q68DI1 518 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR4C16Q8NGL9 310 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR10J5Q8NHC4 309 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 MAFIPQ8WZ33 124 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 AKR1E2Q96JD6 320 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 SULT4A1Q9BR01 284 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
SYNGAP1-204ENST00000449372 GXYLT2A0PJZ3 443 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 J3QRE1 110 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 CD74P04233 296 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 RPS21P63220 83 aaKnown RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 ARHGAP11BQ3KRB8 267 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 DPH1Q9BZG8 443 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 NRSN2Q9GZP1 204 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 APMAPQ9HDC9 416 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 MKKSQ9NPJ1 570 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 CACFD1Q9UGQ2 172 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 ZDHHC8Q9ULC8 765 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 MMACHCQ9Y4U1 282 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 C7orf77A4D0Y5 90 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 BCAT2O15382 392 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 CRTAPO75718 401 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 RAB3DO95716 219 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 PSMB5P28074 263 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 LTBRP36941 435 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 RGS19P49795 217 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 ADPRHP54922 357 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 RPS15AP62244 130 aaKnown RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 RAB30Q15771 203 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 UBE3DQ7Z6J8 389 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 COL26A1Q96A83 441 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 BPIFA2Q96DR5 249 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 TCTN2Q96GX1 697 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 PGLYRP3Q96LB9 341 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 IP6K3Q96PC2 410 aa12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 RIMS4Q9H426 269 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-204ENST00000449372 B3GALT2O43825 422 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 APBB3O95704 486 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 F10P00742 488 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 CD80P33681 288 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 GNALP38405 381 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 SEC13P55735 322 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 HNRNPKP61978 463 aaKnown RBP eCLIP12.21□□□□□ -0.465e-6■■■■□ 22.4
SYNGAP1-204ENST00000449372 ACTBL2Q562R1 376 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 BAP18Q8IXM2 172 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 OR6N1Q8NGY5 312 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 MALSU1Q96EH3 234 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 FN3KRPQ9HA64 309 aa12.21□□□□□ -0.46
SYNGAP1-204ENST00000449372 TRBV2A0A0J9YWF9 115 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 GLOD5A6NK44 160 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 SLC2A1P11166 492 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 RNH1P13489 461 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 GABREP78334 506 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 DHRS11Q6UWP2 260 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 ENPP7Q6UWV6 458 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 CDRT4Q8N9R6 151 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 MFSD9Q8NBP5 474 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 OR56B1Q8NGI3 324 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 SVIPQ8NHG7 77 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 PPP1R1CQ8WVI7 109 aa12.2□□□□□ -0.46
SYNGAP1-204ENST00000449372 FOXJ3Q9UPW0 622 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms