RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
TIMP1-204ENST00000445623 ZNF226Q9NYT6 803 aa11.55□□□□□ -0.56
TIMP1-204ENST00000445623 KCNG2Q9UJ96 466 aa11.55□□□□□ -0.56
TIMP1-204ENST00000445623 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.55□□□□□ -0.56
TIMP1-204ENST00000445623 HCFC1P51610 2035 aa11.55□□□□□ -0.56
TIMP1-204ENST00000445623 ARPC4-TTLL3A0A0A6YYG9 625 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 C12orf71A8MTZ7 269 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 FAM171A2A8MVW0 826 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 TMCC2O75069 709 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 UBL3O95164 117 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 CLIC3O95833 236 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 GAAP10253 952 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 CLUP10909 449 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 SLC2A5P22732 501 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 GSTT1P30711 240 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 CCKARP32238 428 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 PCBD1P61457 104 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
TIMP1-204ENST00000445623 TEKQ02763 1124 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 POU4F2Q12837 409 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 KCNMB1Q16558 191 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 OCLNQ16625 522 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 HIKESHIQ53FT3 197 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 AADACL4Q5VUY2 407 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
TIMP1-204ENST00000445623 THAP5Q7Z6K1 395 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 BBS1Q8NFJ9 593 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 SLC26A10Q8NG04 563 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 NABP1Q96AH0 204 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 ZNF582Q96NG8 517 aaPredicted RBP11.54□□□□□ -0.56
TIMP1-204ENST00000445623 FOXN4Q96NZ1 517 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 MED18Q9BUE0 208 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 CDADC1Q9BWV3 514 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 CCNB1IP1Q9NPC3 277 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 DNAJC27Q9NZQ0 273 aa11.54□□□□□ -0.56
TIMP1-204ENST00000445623 WARS2Q9UGM6 360 aaKnown RBP11.54□□□□□ -0.56
TIMP1-204ENST00000445623 SPTBN1Q01082 2364 aaKnown RBP11.53□□□□□ -0.56
TIMP1-204ENST00000445623 TUBAL3A6NHL2 446 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 PRSS44E7EML9 344 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 CST2P09228 141 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 RNF224P0DH78 156 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 CD79AP11912 226 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 HTR1FP30939 366 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 ENTPD1P49961 510 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 ADAM8P78325 824 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 AQP6Q13520 282 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 MAD2L1BPQ15013 274 aaPredicted RBP11.53□□□□□ -0.56
TIMP1-204ENST00000445623 PPA1Q15181 289 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 USP51Q70EK9 711 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 SYT9Q86SS6 491 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 LRRC18Q8N456 261 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 OR2AJ1Q8NGZ0 328 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 OR52N5Q8NH56 324 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 C11orf40Q8WZ69 217 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 INTS14Q96SY0 518 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 TEAD3Q99594 435 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 SH3GL3Q99963 347 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 ANKRD60Q9BZ19 345 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 RNF121Q9H920 327 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 NGBQ9NPG2 151 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 NPDC1Q9NQX5 325 aaPredicted RBP11.53□□□□□ -0.56
TIMP1-204ENST00000445623 FBXL3Q9UKT7 428 aa11.53□□□□□ -0.56
TIMP1-204ENST00000445623 RELNP78509 3460 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 SH3D21A4FU49 640 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 CCDC182A6NF36 153 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 TVP23AA6NH52 213 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ENTPD6O75354 484 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 RAB36O95755 333 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 GNAO1P09471 354 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 GABRB1P18505 474 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 MYF6P23409 242 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 GRNP28799 593 aaKnown RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ARR3P36575 388 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ISL1P61371 349 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 SCRN3Q0VDG4 424 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 GSG1Q2KHT4 349 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 LINC01590Q5TEZ4 76 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 SHFQ7M4L6 423 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 BCDIN3DQ7Z5W3 292 aaKnown RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ZNF511Q8NB15 262 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 UBE2FQ969M7 185 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ZMYND19Q96E35 227 aaPredicted RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 CNN2Q99439 309 aaKnown RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 ZNF416Q9BWM5 594 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 MARCH7Q9H992 704 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 EMC7Q9NPA0 242 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 HAO2Q9NYQ3 351 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 RPL36Q9Y3U8 105 aaKnown RBP11.52□□□□□ -0.57
TIMP1-204ENST00000445623 COMMD3-BMI1R4GMX3 469 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 DOPEY1Q5JWR5 2465 aa11.52□□□□□ -0.57
TIMP1-204ENST00000445623 CASKO14936 926 aa11.51□□□□□ -0.57
TIMP1-204ENST00000445623 MPZL1O95297 269 aa11.51□□□□□ -0.57
TIMP1-204ENST00000445623 GPANK1O95872 356 aa11.51□□□□□ -0.57
TIMP1-204ENST00000445623 PTHP01270 115 aa11.51□□□□□ -0.57
TIMP1-204ENST00000445623 HLA-HP01893 362 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms