RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PLP2Q04941 152 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 ETFDHQ16134 617 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF544Q6NX49 715 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 VHLLQ6RSH7 139 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 TMEM179BQ7Z7N9 219 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 BIVMQ86UB2 503 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 MUC15Q8N387 334 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 OR4K13Q8NH42 304 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 Q96MF0 132 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 FOXN4Q96NZ1 517 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 SMR3AQ99954 134 aa20.76■□□□□ 0.91
C9orf3-207ENST00000445181 ARID1AO14497 2285 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 ARRDC5A6NEK1 342 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 DEAF1O75398 565 aaPredicted RBP20.75■□□□□ 0.91
C9orf3-207ENST00000445181 KHDRBS3O75525 346 aaKnown RBP20.75■□□□□ 0.91
C9orf3-207ENST00000445181 SOX14O95416 240 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 SERPINA5P05154 406 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 HIST1H1CP16403 213 aaKnown RBP20.75■□□□□ 0.91
C9orf3-207ENST00000445181 MSR1P21757 451 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 APOBEC3AP31941 199 aaPredicted RBP20.75■□□□□ 0.91
C9orf3-207ENST00000445181 CENPAP49450 140 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 CCNIQ14094 377 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 SLC35F1Q5T1Q4 408 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 FAM27BQ5VT28 67 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 DNM1P34Q6PK57 102 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF75AQ96N20 296 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 NMNAT3Q96T66 252 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 NIPSNAP1Q9BPW8 284 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 TRAF4Q9BUZ4 470 aaPredicted RBP20.75■□□□□ 0.91
C9orf3-207ENST00000445181 PLA2G12AQ9BZM1 189 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF556Q9HAH1 456 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 CA10Q9NS85 328 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 IL20Q9NYY1 176 aa20.75■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF469Q96JG9 3925 aaPredicted RBP20.74■□□□□ 0.91
C9orf3-207ENST00000445181 IQCMA0A1B0GVH7 501 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 PTHP01270 115 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 CRABP1P29762 137 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 GALK2Q01415 458 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 COX10Q12887 443 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 FOXL2NBQ6ZUU3 175 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 GLB1L2Q8IW92 636 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 SLC30A7Q8NEW0 376 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 SDR9C7Q8NEX9 313 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 TSSK6Q9BXA6 273 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 NUAK2Q9H093 628 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 C1orf198Q9H425 327 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 POLE4Q9NR33 117 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 CBLN4Q9NTU7 201 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF701Q9NV72 531 aaPredicted RBP20.74■□□□□ 0.91
C9orf3-207ENST00000445181 COA3Q9Y2R0 106 aaPredicted RBP20.74■□□□□ 0.91
C9orf3-207ENST00000445181 SPEF1Q9Y4P9 236 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 AP4S1Q9Y587 144 aa20.74■□□□□ 0.91
C9orf3-207ENST00000445181 USF3Q68DE3 2245 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 H3BN98 237 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 IGFBP1P08833 259 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-207ENST00000445181 CST2P09228 141 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 MMP7P09237 267 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-207ENST00000445181 PAX1P15863 534 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF32P17041 273 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 CDKN1AP38936 164 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 PCBD1P61457 104 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.73■□□□□ 0.91
C9orf3-207ENST00000445181 DAG1Q14118 895 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 KRT80Q6KB66 452 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 DTX2Q86UW9 622 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF584Q8IVC4 421 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 HS3ST5Q8IZT8 346 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 NUP37Q8NFH4 326 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 OR52E2Q8NGJ4 325 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 OR8D4Q8NGM9 314 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 TEX47Q8TBZ9 253 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 UTP4Q969X6 686 aaKnown RBP20.73■□□□□ 0.91
C9orf3-207ENST00000445181 FBXO17Q96EF6 278 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 EMC7Q9NPA0 242 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 ARMC1Q9NVT9 282 aa20.73■□□□□ 0.91
C9orf3-207ENST00000445181 C12orf71A8MTZ7 269 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 VSTM5A8MXK1 200 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 H7C1Q1 480 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 BHLHE40O14503 412 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 CD8AP01732 235 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 HGFACQ04756 655 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 SNTB2Q13425 540 aaKnown RBP20.72■□□□□ 0.91
C9orf3-207ENST00000445181 TBC1D28Q2M2D7 210 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 PABPC1L2AQ5JQF8 200 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 CD300LDQ6UXZ3 194 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 OR2T33Q8NG76 320 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 TRMT61AQ96FX7 289 aaKnown RBP20.72■□□□□ 0.91
C9orf3-207ENST00000445181 TSSK2Q96PF2 358 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 BDH2Q9BUT1 245 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF416Q9BWM5 594 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 CDH20Q9HBT6 801 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 SRA1Q9HD15 236 aaKnown RBP20.72■□□□□ 0.91
C9orf3-207ENST00000445181 RPRD1BQ9NQG5 326 aaKnown RBP20.72■□□□□ 0.91
C9orf3-207ENST00000445181 KIF17Q9P2E2 1029 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 TIMM10BQ9Y5J6 103 aa20.72■□□□□ 0.91
C9orf3-207ENST00000445181 SCG5P05408 212 aa20.71■□□□□ 0.91
C9orf3-207ENST00000445181 ZNF35P13682 527 aa20.71■□□□□ 0.91
C9orf3-207ENST00000445181 PRKACGP22612 351 aa20.71■□□□□ 0.91
C9orf3-207ENST00000445181 FASP25445 335 aa20.71■□□□□ 0.91
C9orf3-207ENST00000445181 APLNRP35414 380 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms