RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 CRYM-AS1A6NIL9 109 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 LSRQ86X29 649 aaPredicted RBP10.28□□□□□ -0.76
FN1-211ENST00000443816 STK35Q8TDR2 534 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 GPBAR1Q8TDU6 330 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 TTC9Q92623 222 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 GINS3Q9BRX5 216 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 A0A1W2PS29 197 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 PCP4L1A6NKN8 68 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 UPK1BO75841 260 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 ZIC2O95409 532 aaPredicted RBP10.28□□□□□ -0.76
FN1-211ENST00000443816 CTXN2P0C2S0 81 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 CST9LP1Q5W188 147 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 CMTM2Q8TAZ6 248 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 TMEM106AQ96A25 262 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 SEMA4CQ9C0C4 833 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 WSB2Q9NYS7 404 aaPredicted RBP10.28□□□□□ -0.76
FN1-211ENST00000443816 ZNF701M0R085 212 aaPredicted RBP10.28□□□□□ -0.76
FN1-211ENST00000443816 P2RY10O00398 339 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 HOXB5P09067 269 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 SNRPD2P62316 118 aaKnown RBP10.28□□□□□ -0.76
FN1-211ENST00000443816 GNB1P62873 340 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 ZNF74Q16587 644 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 SPRED1Q7Z699 444 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 FN3KRPQ9HA64 309 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 HRH3Q9Y5N1 445 aa10.28□□□□□ -0.76
FN1-211ENST00000443816 SPTY2D1-AS1A0A0U1RR47 76 aa10.27□□□□□ -0.76
FN1-211ENST00000443816 SLC2A1P11166 492 aa10.27□□□□□ -0.76
FN1-211ENST00000443816 HTRA4P83105 476 aaPredicted RBP10.27□□□□□ -0.76
FN1-211ENST00000443816 ZNF750Q32MQ0 723 aa10.27□□□□□ -0.76
FN1-211ENST00000443816 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.76
FN1-211ENST00000443816 NHSL2Q5HYW2 709 aa10.27□□□□□ -0.76
FN1-211ENST00000443816 CRLF2Q9HC73 371 aa10.27□□□□□ -0.76
FN1-211ENST00000443816 SRP9P49458 86 aaKnown RBP10.27□□□□□ -0.77
FN1-211ENST00000443816 MEP1BQ16820 701 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 Q499Y3 187 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 PPA2Q9H2U2 334 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 A0A1W2PR48 441 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ICOSLGO75144 302 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ZNF254O75437 659 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 CLDN1O95832 211 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ZDHHC11BP0C7U3 371 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 TGM4P49221 684 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 DUSP2Q05923 314 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 TFAP2EQ6VUC0 442 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 PFN4Q8NHR9 129 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 RASD2Q96D21 266 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ATF6BQ99941 703 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 PLEKHF2Q9H8W4 249 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 CCDC163A0A0D9SF12 145 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 AADACP22760 399 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 CCR2P41597 374 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 FZD2Q14332 565 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 PEA15Q15121 130 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 B3GNT8Q7Z7M8 397 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 TMIGD2Q96BF3 282 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 UHRF2Q96PU4 802 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 R4GN57 208 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ZNF195O14628 629 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ARPC5O15511 151 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 XRCC2O43543 280 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 GLRA1P23415 457 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 CHATP28329 748 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 H2BFWTQ7Z2G1 175 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 DPPA2Q7Z7J5 298 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 CA13Q8N1Q1 262 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 OR13C9Q8NGT0 318 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 OR52A5Q9H2C5 316 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 SLC22A11Q9NSA0 550 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 M0R082 166 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 MT-CO3P00414 261 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 IGLV3-25P01717 112 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 SRMP19623 302 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 TBCEQ15813 527 aaPredicted RBP10.27□□□□□ -0.77
FN1-211ENST00000443816 LEXMQ3ZCV2 418 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 FCRL6Q6DN72 434 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 GGHQ92820 318 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 B3GALT5Q9Y2C3 310 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 TET1Q8NFU7 2136 aa10.27□□□□□ -0.77
FN1-211ENST00000443816 ZNF728P0DKX0 622 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 SHEQ5VZ18 495 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 RGS7BPQ6MZT1 257 aaPredicted RBP10.26□□□□□ -0.77
FN1-211ENST00000443816 CCL4L1Q8NHW4 92 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 BCL7CQ8WUZ0 217 aaPredicted RBP10.26□□□□□ -0.77
FN1-211ENST00000443816 REEP6Q96HR9 211 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 LRFN5Q96NI6 719 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 C1QTNF6Q9BXI9 259 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 SH2D7A6NKC9 451 aaPredicted RBP10.26□□□□□ -0.77
FN1-211ENST00000443816 HSD17B6O14756 317 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 SDHAP31040 664 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 RBP2P50120 134 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 PHC2Q8IXK0 858 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 ASF1BQ9NVP2 202 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 LUZP4Q9P127 313 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 KCNG2Q9UJ96 466 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 COA3Q9Y2R0 106 aaPredicted RBP10.26□□□□□ -0.77
FN1-211ENST00000443816 SLC16A6O15403 523 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 ADGRE4PQ86SQ3 457 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 FAM185AQ8N0U4 392 aa10.26□□□□□ -0.77
FN1-211ENST00000443816 CARFQ8N187 725 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms