RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MYPOPQ86VE0 399 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 FBXL14Q8N1E6 418 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 TRAF4Q9BUZ4 470 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 TSSK6Q9BXA6 273 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 GSX2Q9BZM3 304 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 NUAK2Q9H093 628 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 RACGAP1Q9H0H5 632 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 SEC61A2Q9H9S3 476 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF556Q9HAH1 456 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 CCNB1IP1Q9NPC3 277 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 LAMP3Q9UQV4 416 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 CCDC168Q8NDH2 2452 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ARFGEF3Q5TH69 2177 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 IQCMA0A1B0GVH7 501 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 C12orf71A8MTZ7 269 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 VSTM5A8MXK1 200 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 OVOL3O00110 214 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 SOD3P08294 240 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 PATE4P0C8F1 98 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 FABP6P51161 128 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ACTR3P61158 418 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 LSM6P62312 80 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 RAB39AQ14964 217 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ETFDHQ16134 617 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 KCNMB1Q16558 191 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 CLEC12AQ5QGZ9 265 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 LEG1Q6P5S2 330 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ZBTB46Q86UZ6 589 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF584Q8IVC4 421 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 GLB1L2Q8IW92 636 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 MUC15Q8N387 334 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 OR2T33Q8NG76 320 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 OR8D4Q8NGM9 314 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 OR1J2Q8NGS2 313 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 OR5K1Q8NHB7 308 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 HTRA1Q92743 480 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 NMNAT3Q96T66 252 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF442Q9H7R0 627 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 CBLN4Q9NTU7 201 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF701Q9NV72 531 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 SPEF1Q9Y4P9 236 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 TIMM10BQ9Y5J6 103 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 RTTNQ86VV8 2226 aa13.03□□□□□ -0.32
CSNK1E-210ENST00000442216 SNAP29O95721 258 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 CD8AP01732 235 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 ZNF32P17041 273 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 NR4A1P22736 598 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 NKX6-1P78426 367 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 ENDOGQ14249 297 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 ALDH16A1Q8IZ83 802 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC30A7Q8NEW0 376 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 TEX47Q8TBZ9 253 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 FBXO17Q96EF6 278 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 DDOQ99489 341 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 CA10Q9NS85 328 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 KLHL21Q9UJP4 597 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 FBXO9Q9UK97 447 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 B9D1Q9UPM9 204 aa13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 COA3Q9Y2R0 106 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-210ENST00000442216 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 IGLV1-36A0A0B4J1U3 117 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 OR6C68A6NDL8 312 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SOX14O95416 240 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 BMP4P12644 408 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 OSMP13725 252 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 PSG4Q00888 419 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 GALK2Q01415 458 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 HSF2Q03933 536 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 HGFACQ04756 655 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 GLO1Q04760 184 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SCRN3Q0VDG4 424 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 DAG1Q14118 895 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 TBC1D28Q2M2D7 210 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC36A3Q495N2 470 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 PABPC1L2AQ5JQF8 200 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 ZNF362Q5T0B9 420 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SLC35F1Q5T1Q4 408 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SHEQ5VZ18 495 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 ZFP1Q6P2D0 407 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 FAHD1Q6P587 224 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 PRSS57Q6UWY2 283 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 HS3ST5Q8IZT8 346 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SVOPLQ8N434 492 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 ATG16L2Q8NAA4 619 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 SDR9C7Q8NEX9 313 aa13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 TRMT61AQ96FX7 289 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-210ENST00000442216 ZNF416Q9BWM5 594 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms