RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MLF1P58340 268 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 RRAS2P62070 204 aaPredicted RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 EGR3Q06889 387 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SRSF1Q07955 248 aaKnown RBP eCLIP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PLCXD2Q0VAA5 305 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MAB21L1Q13394 359 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 IL18Q14116 193 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PON3Q15166 354 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PLA1AQ53H76 456 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CLEC12AQ5QGZ9 265 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ELFN2Q5R3F8 820 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CREB3L2Q70SY1 520 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FGD2Q7Z6J4 655 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CD163Q86VB7 1156 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF227Q86WZ6 799 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FAM98AQ8NCA5 519 aaKnown RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 AKAP1Q92667 903 aaKnown RBP eCLIP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 HAS2Q92819 552 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MARVELD3Q96A59 401 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MED30Q96HR3 178 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 WACQ9BTA9 647 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 TMED9Q9BVK6 235 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 WWTR1Q9GZV5 400 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SLC6A15Q9H2J7 730 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 DPAGT1Q9H3H5 408 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 TIGARQ9NQ88 270 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FLRT3Q9NZU0 649 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 EXTL2Q9UBQ6 330 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 TUBD1Q9UJT1 453 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 VDAC3Q9Y277 283 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 NIPBLQ6KC79 2804 aaeCLIP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 H0YC42 278 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FRS3O43559 492 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 IGHMP01871 453 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CLEC2LP0C7M8 214 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 GSTT2P0CG29 244 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 GSTT2BP0CG30 244 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PRG2P13727 222 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ABCD3P28288 659 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 STARP49675 285 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 GZMKP49863 264 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MECP2P51608 486 aaKnown RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MAP2K6P52564 334 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SLC37A1P57057 533 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SIRPAP78324 504 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 IFITM2Q01629 132 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PLAURQ03405 335 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MXD1Q05195 221 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CDSNQ15517 529 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF791Q3KP31 576 aaPredicted RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ZMAT1Q5H9K5 638 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF684Q5T5D7 378 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 DNM1P46Q6ZS02 220 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MISPQ8IVT2 679 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SLC35F2Q8IXU6 374 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM99Q8N816 258 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF615Q8N8J6 731 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 BBS1Q8NFJ9 593 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 LILRB4Q8NHJ6 448 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PFN4Q8NHR9 129 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 M1APQ8TC57 530 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 HGDQ93099 445 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 LAT2Q9GZY6 243 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ABCG5Q9H222 651 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 RANBP3Q9H6Z4 567 aaPredicted RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FKRPQ9H9S5 495 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SLC17A5Q9NRA2 495 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 UBQLN4Q9NRR5 601 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SACM1LQ9NTJ5 587 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FBXO34Q9NWN3 711 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 COMMD3Q9UBI1 195 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 YARS2Q9Y2Z4 477 aaKnown RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CACNG2Q9Y698 323 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 JMJD1CQ15652 2540 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF469Q96JG9 3925 aaPredicted RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 ABCA2Q9BZC7 2435 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 TUBAL3A6NHL2 446 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 FAM90A27PA6NNH2 459 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 LRRN3E7EW58 273 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 ELK1P19419 428 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 C4BPBP20851 252 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 IL12BP29460 328 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 UQCRC1P31930 480 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 LSM11P83369 360 aaKnown RBP eCLIP4.26□□□□□ -1.736e-7■■■■■ 28.7
EDEM3-203ENST00000439962 EBPQ15125 230 aaKnown RBP4.26□□□□□ -1.73
EDEM3-203ENST00000439962 TATDN3Q17R31 274 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 NDUFAF6Q330K2 333 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 ACSM3Q53FZ2 586 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 WIPI1Q5MNZ9 446 aaPredicted RBP4.26□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF787Q6DD87 383 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 LRRC75AQ8NAA5 344 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM178AQ8NBL3 297 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 OR10H4Q8NGA5 316 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 OR13C2Q8NGS9 318 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 ASB17Q8WXJ9 295 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM203Q969S6 136 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 MIB2Q96AX9 1013 aa4.26□□□□□ -1.73
EDEM3-203ENST00000439962 C4orf36Q96KX1 117 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms