RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZNF823P16415 610 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 CD96P40200 585 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 SLC17A1Q14916 467 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 P2RY14Q15391 338 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 YIF1BQ5BJH7 314 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 FAM209AQ5JX71 171 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 FAM205BPQ63HN1 556 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 MZT2AQ6P582 158 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 DNM1P34Q6PK57 102 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 PAMR1Q6UXH9 720 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 UNQ9370/PRO34162Q6UXP9 181 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 DCXRQ7Z4W1 244 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 KRT77Q7Z794 578 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 GLRX5Q86SX6 157 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 ZNF679Q8IYX0 411 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 SIGLEC12Q96PQ1 595 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 CCDC32Q9BV29 185 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 HES7Q9BYE0 225 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 ZMAT5Q9UDW3 170 aaKnown RBP14.86□□□□□ -0.03
USHBP1-203ENST00000431146 UGT2A1Q9Y4X1 527 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 A0A0J9YW62 118 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 A0A1B0GVC2 190 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 ISPDA4D126 451 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 A6NIN4 97 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 OR4C45A6NMZ5 311 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 FAM25AB3EWG3 89 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 FAM25CB3EWG5 89 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 FAM25GB3EWG6 89 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 KHDRBS3O75525 346 aaKnown RBP14.86□□□□□ -0.03
USHBP1-203ENST00000431146 TRAPPC6AO75865 159 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 PMS2P2O95744 297 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 PNPP00491 289 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 SPNP16150 400 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 ELK1P19419 428 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 APEX1P27695 318 aaKnown RBP14.86□□□□□ -0.03
USHBP1-203ENST00000431146 RFC3P40938 356 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 KIR3DL2P43630 455 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 CLDN20P56880 219 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 B3GALT5-AS1P59052 145 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 MFAP5Q13361 173 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 PYDC2Q56P42 97 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 WDR38Q5JTN6 314 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 CEP78Q5JTW2 689 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 LINC00696Q6ZRV3 163 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 ZNF676Q8N7Q3 588 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 NOXO1Q8NFA2 376 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 SLC25A44Q96H78 314 aaPredicted RBP14.86□□□□□ -0.03
USHBP1-203ENST00000431146 DERL3Q96Q80 235 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 RBP7Q96R05 134 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 PIGQQ9BRB3 760 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 PLA2G3Q9NZ20 509 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 SLC22A13Q9Y226 551 aa14.86□□□□□ -0.03
USHBP1-203ENST00000431146 TRAV1-2A0A0B4J238 106 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 A0A1W2PPL8 197 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 SSX4O60224 188 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 DOK2O60496 412 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 SRMP19623 302 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 CFL1P23528 166 aaKnown RBP14.85□□□□□ -0.03
USHBP1-203ENST00000431146 FKBP2P26885 142 aaKnown RBP14.85□□□□□ -0.03
USHBP1-203ENST00000431146 CDAP32320 146 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 EIF1AXP47813 144 aaKnown RBP14.85□□□□□ -0.03
USHBP1-203ENST00000431146 CLDN17P56750 224 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 MFGE8Q08431 387 aaPredicted RBP14.85□□□□□ -0.03
USHBP1-203ENST00000431146 TAB1Q15750 504 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 WIPI1Q5MNZ9 446 aaPredicted RBP14.85□□□□□ -0.03
USHBP1-203ENST00000431146 UBQLNLQ8IYU4 475 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 ASB17Q8WXJ9 295 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 FBXL3Q9UKT7 428 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 CLEC4AQ9UMR7 237 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 LRP12Q9Y561 859 aa14.85□□□□□ -0.03
USHBP1-203ENST00000431146 CENPBD1B2RD01 187 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 EIF1AYO14602 144 aaKnown RBP14.84□□□□□ -0.03
USHBP1-203ENST00000431146 SEC14L5O43304 696 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 IGHG1P01857 330 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 IL7P13232 177 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 ATF1P18846 271 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 SRD5A2P31213 254 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 EVX1P49640 407 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 H3F3AP84243 136 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 ABHD17BQ5VST6 288 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 XKRXQ6PP77 449 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 GLB1L2Q8IW92 636 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 ZNF433Q8N7K0 673 aaPredicted RBP14.84□□□□□ -0.03
USHBP1-203ENST00000431146 SAMD12Q8N8I0 201 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 OR52N5Q8NH56 324 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 C11orf40Q8WZ69 217 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 C4orf45Q96LM5 186 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 SRXN1Q9BYN0 137 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 SEC61A2Q9H9S3 476 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 TBC1D24Q9ULP9 559 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 MUC6Q6W4X9 2439 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 NEURL1O76050 574 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 EIF4EP06730 217 aaKnown RBP14.84□□□□□ -0.03
USHBP1-203ENST00000431146 ZNF17P17021 662 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 ENPP1P22413 925 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 GDF1P27539 372 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 STARP49675 285 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 NUBP1P53384 320 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 RAC1P63000 192 aa14.84□□□□□ -0.03
USHBP1-203ENST00000431146 IL18Q14116 193 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms