RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 NDUFB7P17568 137 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 PSMB6P28072 239 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SMAD2Q15796 467 aaKnown RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 COL5A1-AS1Q5SY13 56 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SLC39A11Q8N1S5 342 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 OR52R1Q8NGF1 315 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 PTRH2Q9Y3E5 179 aaKnown RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 INSL5Q9Y5Q6 135 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 FLVCR1Q9Y5Y0 555 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SGK494L7N484 410 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 STUMQ69YW2 141 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 LETMD1Q6P1Q0 360 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 C15orf52Q6ZUT6 534 aaKnown RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 UBALD1Q8TB05 177 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 PLA2G12AQ9BZM1 189 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 MED20Q9H944 212 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SETD1AO15047 1707 aaKnown RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 A0A0A6YYJ9 748 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SNNO75324 88 aaPredicted RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 HOXD13P35453 343 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 UQCRFS1P47985 274 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 ZNF280AP59817 542 aaPredicted RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 MBD3L1Q8WWY6 194 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 DHRS4Q9BTZ2 278 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 RTTNQ86VV8 2226 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 LDB3O75112 727 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 RPS25P62851 125 aaKnown RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 DGAT2L7PQ6IED9 249 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 CHD5Q8TDI0 1954 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SETBP1Q9Y6X0 1596 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 NEURL1O76050 574 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 GRPP07492 148 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SRSF9Q13242 221 aaKnown RBP eCLIP15.2■□□□□ 0.02
RIF1-204ENST00000430328 RANBP10Q6VN20 620 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 FUBP1Q96AE4 644 aaKnown RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 GPX7Q96SL4 187 aaPredicted RBP15.2■□□□□ 0.02
RIF1-204ENST00000430328 OCEL1Q9H607 264 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 CBLCQ9ULV8 474 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 GABRR3A8MPY1 467 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 FDXRP22570 491 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SHC1P29353 583 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 TBC1D28Q2M2D7 210 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 POM121Q96HA1 1249 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 SNX11Q9Y5W9 270 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 KDM6BO15054 1643 aa15.2■□□□□ 0.02
RIF1-204ENST00000430328 OPN1LWP04000 364 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 ACRP10323 421 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 PTBP1P26599 531 aaKnown RBP eCLIP15.19■□□□□ 0.027e-7■■□□□ 13.8
RIF1-204ENST00000430328 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
RIF1-204ENST00000430328 DEFB110Q30KQ9 67 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 ZNF516Q92618 1163 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 CAPNS2Q96L46 248 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 FZD8Q9H461 694 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 NAT8BQ9UHF3 227 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 NFS1Q9Y697 457 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 PAPLNO95428 1278 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 ZNF595Q8IYB9 648 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 PLEKHA2Q9HB19 425 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 DUSP13Q9UII6 198 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 A0A087X0M5 115 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 A0A1B0GX30 115 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 AQP8O94778 261 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 CLDN17P56750 224 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 FAM182AQ5T1J6 154 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 C5orf46Q6UWT4 87 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 GLIS1Q8NBF1 620 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 ACVR1CQ8NER5 493 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 CCSO14618 274 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 ALKBH1Q13686 389 aaKnown RBP15.19■□□□□ 0.02
RIF1-204ENST00000430328 LRP11Q86VZ4 500 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 OR5D13Q8NGL4 314 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.19■□□□□ 0.02
RIF1-204ENST00000430328 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.19■□□□□ 0.02
RIF1-204ENST00000430328 F5H697 171 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 CHRM2P08172 466 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 TSPAN31Q12999 210 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 OR1L3Q8NH93 324 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 NPY6RQ99463 290 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 LRIT1Q9P2V4 623 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 IGSF11Q5DX21 431 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 ACOT4Q8N9L9 421 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 OR4C12Q96R67 309 aa15.19■□□□□ 0.02
RIF1-204ENST00000430328 LAMTOR5O43504 91 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 GOSR1O95249 250 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 WNT11O96014 354 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 ICAM2P13598 275 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 GCSHP23434 173 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 LMAN2Q12907 356 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 SLC35E4Q6ICL7 350 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 ANGPTL5Q86XS5 388 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 KAZALD1Q96I82 304 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 GYPAP02724 150 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 SMPD1P17405 629 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 RPL12P30050 165 aaKnown RBP15.18■□□□□ 0.02
RIF1-204ENST00000430328 SLC10A2Q12908 348 aaPredicted RBP15.18■□□□□ 0.02
RIF1-204ENST00000430328 PHYHIPLQ96FC7 376 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 HMGN2P05204 90 aaKnown RBP15.18■□□□□ 0.02
RIF1-204ENST00000430328 FGF4P08620 206 aa15.18■□□□□ 0.02
RIF1-204ENST00000430328 MGMTP16455 207 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms