RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 POLE4Q9NR33 117 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 CCDC59Q9P031 241 aaKnown RBP8.04□□□□□ -1.12
NR1I3-209ENST00000428574 SPRR3Q9UBC9 169 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 CLCF1Q9UBD9 225 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 CYB5R1Q9UHQ9 305 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 ST6GALNAC2Q9UJ37 374 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 ING1Q9UK53 422 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-209ENST00000428574 COPS3Q9UNS2 423 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 COA3Q9Y2R0 106 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-209ENST00000428574 NOSIPQ9Y314 301 aaKnown RBP8.04□□□□□ -1.12
NR1I3-209ENST00000428574 SF3B6Q9Y3B4 125 aaKnown RBP8.04□□□□□ -1.12
NR1I3-209ENST00000428574 LIPGQ9Y5X9 500 aa8.04□□□□□ -1.12
NR1I3-209ENST00000428574 CD8B2A6NJW9 211 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 ACOD1A6NK06 481 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 SLC22A20A6NK97 555 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 TMEM212A6NML5 194 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 H0YC42 278 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 J3QLW9 94 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 SS18L1O75177 396 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-209ENST00000428574 MRPL33O75394 65 aaKnown RBP8.03□□□□□ -1.12
NR1I3-209ENST00000428574 SC5DO75845 299 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 IL1AP01583 271 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 CRHP06850 196 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 SFTPCP11686 197 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 ZNF19P17023 458 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 CELP19835 753 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 CRYBB2P43320 205 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 OR12D2P58182 307 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 HIST1H3AP68431 136 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 FMODQ06828 376 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 AQP6Q13520 282 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 HIST2H3PS2Q5TEC6 136 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 FAM27BQ5VT28 67 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 LIPKQ5VXJ0 399 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 FAM180AQ6UWF9 173 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 HIST2H3AQ71DI3 136 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 SSX6Q7RTT6 188 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 FGD2Q7Z6J4 655 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 KLBQ86Z14 1044 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 TEX19Q8NA77 164 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 ST7LQ8TDW4 575 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 ABHD17AQ96GS6 310 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 BOD1Q96IK1 185 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 TBX5Q99593 518 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 CDADC1Q9BWV3 514 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 PRRG4Q9BZD6 226 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 NAA50Q9GZZ1 169 aaKnown RBP8.03□□□□□ -1.12
NR1I3-209ENST00000428574 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 SLCO5A1Q9H2Y9 848 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 C1orf198Q9H425 327 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 ISG20L2Q9H9L3 353 aaKnown RBP8.03□□□□□ -1.12
NR1I3-209ENST00000428574 MALT1Q9UDY8 824 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 MRM2Q9UI43 246 aaKnown RBP8.03□□□□□ -1.12
NR1I3-209ENST00000428574 GNG8Q9UK08 70 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 LHX6Q9UPM6 363 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 UGT2A1Q9Y4X1 527 aa8.03□□□□□ -1.12
NR1I3-209ENST00000428574 IGHV3-15A0A0B4J1V0 119 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 IGKV1D-43A0A0B4J1Z2 117 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ANKRD61A6NGH8 418 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 TVP23AA6NH52 213 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ZNF878C9JN71 531 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 WDR1O75083 606 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 UPK3AO75631 287 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ARL6IP5O75915 188 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 RGS9O75916 674 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ATE1O95260 518 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 LALBAP00709 142 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 APOC1P02654 83 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 PDGFAP04085 211 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 CST2P09228 141 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 SPARCP09486 303 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 KLK2P20151 261 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 CFL1P23528 166 aaKnown RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 CTSSP25774 331 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 MAPK3P27361 379 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 OPRL1P41146 370 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 SELENOPP49908 381 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 MMP16P51512 607 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 RIDAP52758 137 aaKnown RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 PCBD1P61457 104 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 GRB2P62993 217 aaKnown RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ECH1Q13011 328 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 EIF2B1Q14232 305 aaKnown RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 GUSBP1Q15486 140 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ETFDHQ16134 617 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 DGUOKQ16854 277 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ZNF829Q3KNS6 432 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 YIF1BQ5BJH7 314 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ZNF324BQ6AW86 544 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-209ENST00000428574 UNQ6494/PRO21346Q6UXR6 183 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 KRT77Q7Z794 578 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 OR2AJ1Q8NGZ0 328 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 FNDC9Q8TBE3 224 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 DYNC2LI1Q8TCX1 351 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ABHD3Q8WU67 409 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 C11orf40Q8WZ69 217 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 ROBO4Q8WZ75 1007 aa8.02□□□□□ -1.13
NR1I3-209ENST00000428574 NABP1Q96AH0 204 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms