RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ARGFXA6NJG6 315 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 TM4SF5O14894 197 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 PIN1P1O15428 100 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 KIR3DL2P43630 455 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 HSD17B12Q53GQ0 312 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 SFXN4Q6P4A7 337 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 MZT2AQ6P582 158 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 DCXRQ7Z4W1 244 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 SULF2Q8IWU5 870 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 ST7LQ8TDW4 575 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 DIRAS2Q96HU8 199 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 SMAD5Q99717 465 aaKnown RBP23.58■■□□□ 1.36
LDB1-202ENST00000425280 IRF2BPLQ9H1B7 796 aa23.58■■□□□ 1.36
LDB1-202ENST00000425280 TRABD2BA6NFA1 517 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 ACOD1A6NK06 481 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 EIF1AYO14602 144 aaKnown RBP23.57■■□□□ 1.36
LDB1-202ENST00000425280 MAGEB3O15480 346 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 DNPH1O43598 174 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 HPGDSO60760 199 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 LIPCP11150 499 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 CEACAM1P13688 526 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 RAB3BP20337 219 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 ENPP1P22413 925 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 RAC3P60763 192 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 MFAP5Q13361 173 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 ZNF79Q15937 498 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 STEAP3Q658P3 488 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 IGF2-ASQ6U949 168 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 OR9K2Q8NGE7 335 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 ACOT12Q8WYK0 555 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 MCHR2Q969V1 340 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 DERL3Q96Q80 235 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 UGT2A1Q9Y4X1 527 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 LRP12Q9Y561 859 aa23.57■■□□□ 1.36
LDB1-202ENST00000425280 A0A1W2PPL8 197 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 THBS2P35442 1172 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 STARP49675 285 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 RASGEF1BQ0VAM2 473 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 WDR38Q5JTN6 314 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 OR7E24Q6IFN5 339 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 SYT9Q86SS6 491 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 MFRPQ9BY79 579 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 ZNF292O60281 2723 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 TMEM212A6NML5 194 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 RFC3P40938 356 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 NOVA1P51513 510 aaKnown RBP23.56■■□□□ 1.36
LDB1-202ENST00000425280 RIDAP52758 137 aaKnown RBP23.56■■□□□ 1.36
LDB1-202ENST00000425280 SUCLG1P53597 346 aaKnown RBP23.56■■□□□ 1.36
LDB1-202ENST00000425280 GFRA1P56159 465 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 SRSF6Q13247 344 aaKnown RBP23.56■■□□□ 1.36
LDB1-202ENST00000425280 SLC25A35Q3KQZ1 300 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 CEP78Q5JTW2 689 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 OR10H5Q8NGA6 315 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 ORAI1Q96D31 301 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 ZNF385AQ96PM9 386 aaKnown RBP23.56■■□□□ 1.36
LDB1-202ENST00000425280 CCDC32Q9BV29 185 aa23.56■■□□□ 1.36
LDB1-202ENST00000425280 ZNF703Q9H7S9 590 aaPredicted RBP23.56■■□□□ 1.36
LDB1-202ENST00000425280 TRBV5-5A0A0J9YX44 114 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 A6NL46 340 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 NPIPA2E9PIF3 369 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 NPIPA3F8WFD2 350 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 SMAD9O15198 467 aaKnown RBP23.55■■□□□ 1.36
LDB1-202ENST00000425280 TLX3O43711 291 aaPredicted RBP23.55■■□□□ 1.36
LDB1-202ENST00000425280 PNPP00491 289 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 QDPRP09417 244 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 CARD18P57730 90 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 OXA1LQ15070 435 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 LRFN4Q6PJG9 635 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 CORO6Q6QEF8 472 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 ESPNLQ6ZVH7 1005 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 UBQLNLQ8IYU4 475 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 ZNF676Q8N7Q3 588 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 ADGRG7Q96K78 797 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 COMMD4Q9H0A8 199 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 B3GAT2Q9NPZ5 323 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 ISPDA4D126 451 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 Q499Y3 187 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 FAM131AQ6UXB0 335 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 ASB18Q6ZVZ8 466 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 KCTD12Q96CX2 325 aaKnown RBP23.55■■□□□ 1.36
LDB1-202ENST00000425280 OR2M2Q96R28 347 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 SRRQ9GZT4 340 aa23.55■■□□□ 1.36
LDB1-202ENST00000425280 FABP12A6NFH5 140 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 TMCC2O75069 709 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 SRMP19623 302 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 POU3F2P20265 443 aaPredicted RBP23.54■■□□□ 1.36
LDB1-202ENST00000425280 CCR9P51686 369 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 MFGE8Q08431 387 aaPredicted RBP23.54■■□□□ 1.36
LDB1-202ENST00000425280 TMPRSS7Q7RTY8 843 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 RDH10Q8IZV5 341 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 MDS2Q8NDY4 140 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 COX4I2Q96KJ9 171 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 SEC61A2Q9H9S3 476 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 POLE4Q9NR33 117 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 B4GALT7Q9UBV7 327 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 CYB5R1Q9UHQ9 305 aa23.54■■□□□ 1.36
LDB1-202ENST00000425280 CDAP32320 146 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 CLDN15P56746 228 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 ODF4Q2M2E3 257 aa23.53■■□□□ 1.36
LDB1-202ENST00000425280 TRIM16LQ309B1 348 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms