RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ATRAIDQ6UW56 229 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NPSR1Q6W5P4 371 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 IL34Q6ZMJ4 242 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ARCQ7LC44 396 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 EFL1Q7Z2Z2 1120 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TAC4Q86UU9 113 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 DEFB107AQ8IZN7 70 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PACRGLQ8N7B6 248 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ARIH2OSQ8N7S6 290 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF557Q8N988 423 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 C12orf29Q8N999 325 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 LPCAT1Q8NF37 534 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 BBS1Q8NFJ9 593 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 BPIFB6Q8NFQ5 453 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 OR10J5Q8NHC4 309 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SFT2D1Q8WV19 159 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SLC5A11Q8WWX8 675 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ATP6V1E2Q96A05 226 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 CPNE4Q96A23 557 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 EXOSC8Q96B26 276 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 CCDC124Q96CT7 223 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 VPS39Q96JC1 886 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 C7orf34Q96L11 122 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 FER1L6-AS2Q96M78 137 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 KCTD14Q9BQ13 255 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MTG1Q9BT17 334 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 CHRDL1Q9BU40 450 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MED18Q9BUE0 208 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 FUNDC2Q9BWH2 189 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SLIRPQ9GZT3 109 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NXF2Q9GZY0 626 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 OPN3Q9H1Y3 402 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 GANQ9H2C0 597 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 DSN1Q9H410 356 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SYNDIG1Q9H7V2 258 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SPACA1Q9HBV2 294 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SLC25A19Q9HC21 320 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ACP6Q9NPH0 428 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 BIN3Q9NQY0 253 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 EXD2Q9NVH0 621 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MED9Q9NWA0 146 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TAS2R9Q9NYW1 312 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SLC17A7Q9P2U7 560 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 UXTQ9UBK9 157 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 MIOXQ9UGB7 285 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NUFIP1Q9UHK0 495 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 SH3BGRL2Q9UJC5 107 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF223Q9UK11 482 aaPredicted RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TBC1D24Q9ULP9 559 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 PRPF19Q9UMS4 504 aaKnown RBP2.45□□□□□ -2.02
LINC01040-201ENST00000425048 NDUFAF1Q9Y375 327 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 WSB1Q9Y6I7 421 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 RGPD2P0DJD1 1756 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 TMEM2Q9UHN6 1383 aa2.45□□□□□ -2.02
LINC01040-201ENST00000425048 LTN1O94822 1766 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 UBR2Q8IWV8 1755 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 IGLV4-60A0A075B6I1 120 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 LOC100653049A0A140TA62 436 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 EXOC1LA0A1B0GW35 172 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TCRBV3S1A0A5B6 114 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CCDC182A6NF36 153 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 OR6C70A6NIJ9 312 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 FAM74A7A6NL05 159 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 L7N2F9 121 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 COPEO14579 308 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PSMA7O14818 248 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SLC30A4O14863 429 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RRP8O43159 456 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MRPS14O60783 128 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TRIM3O75382 744 aaPredicted RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CRTAPO75718 401 aaPredicted RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 KRT34O76011 436 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 TDP2O95551 362 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 APOA1P02647 267 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 FTH1P02794 183 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 S100A8P05109 93 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ALPPP05187 535 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 C2P06681 752 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 STSP08842 583 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ACSM4P0C7M7 580 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 COX4I1P13073 169 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CD36P16671 472 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SPI1P17947 270 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RAB4AP20338 218 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 OGNP20774 298 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MAGP20916 626 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 PCMT1P22061 227 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 IGHV1-2P23083 117 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 WARSP23381 471 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ATP5A1P25705 553 aaKnown RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 HLA-DMAP28067 261 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 ATP6V1E1P36543 226 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 NUP62P37198 522 aaPredicted RBP2.44□□□□□ -2.02
LINC01040-201ENST00000425048 RAD52P43351 418 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SERPINB10P48595 397 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 MARCKSL1P49006 195 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 SERPINB9P50453 376 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 NME5P56597 212 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 CARD18P57730 90 aa2.44□□□□□ -2.02
LINC01040-201ENST00000425048 KCNK10P57789 538 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms