RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 RERGLQ9H628 205 aa19.29■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CDH20Q9HBT6 801 aa19.29■□□□□ 0.68
PTCHD3P2-201ENST00000424937 SPEF1Q9Y4P9 236 aa19.29■□□□□ 0.68
PTCHD3P2-201ENST00000424937 VSTM5A8MXK1 200 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 B9A039 149 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 IMPA2O14732 288 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 GPRIN2O60269 458 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 PTHP01270 115 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CCL2P13500 99 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 APEHP13798 732 aaKnown RBP19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 RAB35Q15286 201 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 EFNB3Q15768 340 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 TBC1D28Q2M2D7 210 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 PABPC1L2AQ5JQF8 200 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 ZNF770Q6IQ21 691 aaPredicted RBP19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 AQP11Q8NBQ7 271 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CANT1Q8WVQ1 401 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 C18orf12Q96KH6 178 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 BDH2Q9BUT1 245 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CHID1Q9BWS9 393 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CADM1Q9BY67 442 aaKnown RBP19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 EGLN3Q9H6Z9 239 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 POLE4Q9NR33 117 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 VSX1Q9NZR4 365 aaPredicted RBP19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 SLC7A8Q9UHI5 535 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 POMPQ9Y244 141 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CDH10Q9Y6N8 788 aa19.28■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CR1P17927 2039 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 SSX4O60224 188 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 SLC16A7O60669 478 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CST1P01037 141 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CST2P09228 141 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 FOSL1P15407 271 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 APEX1P27695 318 aaKnown RBP19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CDKN2AP42771 156 aaKnown RBP19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 ERFP50548 548 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 JAZF1Q86VZ6 243 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CIARTQ8N365 385 aaPredicted RBP19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 SVOPLQ8N434 492 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 PAQR4Q8N4S7 273 aaPredicted RBP19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 OR52L1Q8NGH7 329 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 ZNF416Q9BWM5 594 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 EMC7Q9NPA0 242 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 CMAHPQ9Y471 501 aa19.27■□□□□ 0.68
PTCHD3P2-201ENST00000424937 SMAD7O15105 426 aaKnown RBP19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 GSC2O15499 205 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 GASTP01350 101 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 SCG5P05408 212 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 INHBBP09529 407 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 NOS3P29474 1203 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 APLNRP35414 380 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 RASSF2P50749 326 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 RPS23P62266 143 aaKnown RBP19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 ENDOGQ14249 297 aaKnown RBP19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 MICAQ29983 383 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 CLEC12AQ5QGZ9 265 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 RPL13AP3Q6NVV1 102 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 LEG1Q6P5S2 330 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 CPEB3Q8NE35 698 aaKnown RBP19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 OR1J2Q8NGS2 313 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 AKR7LQ8NHP1 331 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 COX4I2Q96KJ9 171 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 NUAK2Q9H093 628 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 LRMDAQ9H2I8 198 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 OR51B6Q9H340 312 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 PLK3Q9H4B4 646 aa19.26■□□□□ 0.67
PTCHD3P2-201ENST00000424937 ARPC3O15145 178 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 KHDRBS3O75525 346 aaKnown RBP19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 ATP5HO75947 161 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 FAM157BP0CG42 384 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 HIST1H1CP16403 213 aaKnown RBP19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 GLRXP35754 106 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 PCBD1P61457 104 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 PSG4Q00888 419 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 TNK1Q13470 666 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 DNM1P34Q6PK57 102 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 UGT2A3Q6UWM9 527 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 OR10G2Q8NGC3 310 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 OR4K13Q8NH42 304 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 VRK1Q99986 396 aaPredicted RBP19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 OR2H1Q9GZK4 316 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 TBC1D23Q9NUY8 699 aa19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 COA3Q9Y2R0 106 aaPredicted RBP19.25■□□□□ 0.67
PTCHD3P2-201ENST00000424937 C12orf71A8MTZ7 269 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 GNGT2O14610 69 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 SNAP29O95721 258 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 RENP00797 406 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 CCNOP22674 350 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 STOMP27105 288 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 MSMPQ1L6U9 139 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 OTPQ5XKR4 325 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 RASSF6Q6ZTQ3 369 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 SDR9C7Q8NEX9 313 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 MRPL24Q96A35 216 aaKnown RBP19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 TSSK2Q96PF2 358 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 SORCS2Q96PQ0 1159 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 NMNAT3Q96T66 252 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 MRPL37Q9BZE1 423 aaKnown RBP19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 PLA2G12AQ9BZM1 189 aa19.24■□□□□ 0.67
PTCHD3P2-201ENST00000424937 WNT5BQ9H1J7 359 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms