RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MCOLN3Q8TDD5 553 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 BLOC1S5Q8TDH9 187 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 DOK4Q8TEW6 326 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 FLYWCH2Q96CP2 140 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 MOCOSQ96EN8 888 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RMND5BQ96G75 393 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 HSFY1Q96LI6 401 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PSMB7Q99436 277 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 APOL4Q9BPW4 351 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RBKSQ9H477 322 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF385DQ9H6B1 395 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 Q9HAA7 133 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF334Q9HCZ1 680 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ZDHHC4Q9NPG8 344 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 ACP6Q9NPH0 428 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM9Q9P0T7 183 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 NYAP2Q9P242 653 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 PRODH2Q9UF12 536 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 CIDEBQ9UHD4 219 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 LGALS13Q9UHV8 139 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 KCNG2Q9UJ96 466 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 RALYQ9UKM9 306 aaKnown RBP3.14□□□□□ -1.91
SF3B1-205ENST00000424674 SELENOKQ9Y6D0 94 aa3.14□□□□□ -1.91
SF3B1-205ENST00000424674 KIF24Q5T7B8 1368 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CEMIPQ8WUJ3 1361 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ZMYM2Q9UBW7 1377 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 A0A0B4J2E0 115 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DS1A0A191URI9 304 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 hCG_38984A0A1B0GV85 526 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 A0A1B0GX12 115 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 VPS37CA5D8V6 355 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 LYRM9A8MSI8 78 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 H3BMQ9 156 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PFDN6O15212 129 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 FGF16O43320 207 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CLDN11O75508 207 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 DCTN3O75935 186 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CDK2AP2O75956 126 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TDP2O95551 362 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 SNAP29O95721 258 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CATP04040 527 aaKnown RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 HOXB7P09629 217 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 FGF3P11487 239 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PVALBP20472 110 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 C21orf33P30042 268 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 SAA4P35542 130 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 DDOSTP39656 456 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TSFMP43897 325 aaKnown RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TFPI2P48307 235 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 STC1P52823 247 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CDH11P55287 796 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TAS2R39P59534 338 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 RPL31P62899 125 aaKnown RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PRKCDQ05655 676 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF33BQ06732 778 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 GTF2H2Q13888 395 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 SMCO1Q147U7 214 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 KIR2DS1Q14954 304 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 GPNMBQ14956 572 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ARL6IP1Q15041 203 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 OXA1LQ15070 435 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 SLC9A3R2Q15599 337 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TIGITQ495A1 244 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF658BQ4V348 819 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CCDC58Q4VC31 144 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 GTF2H2CQ6P1K8 395 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ZNF530Q6P9A1 599 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 LCLAT1Q6UWP7 414 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 FAM131AQ6UXB0 335 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 FRRS1Q6ZNA5 592 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PLA2G4DQ86XP0 818 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 WDFY1Q8IWB7 410 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 RIMKLAQ8IXN7 391 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 VKORC1L1Q8N0U8 176 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PUSL1Q8N0Z8 303 aaKnown RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 BPIFB2Q8N4F0 458 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM35BQ8NCS4 154 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 DUSP18Q8NEJ0 188 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PXT1Q8NFP0 134 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 OR9Q2Q8NGE9 314 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 OR9A4Q8NGU2 314 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 OLIG1Q8TAK6 271 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 SYNPRQ8TBG9 265 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 PYROXD1Q8WU10 500 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM174Q8WUU8 243 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TCTEX1D2Q8WW35 142 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 IGFBPL1Q8WX77 278 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 LZICQ8WZA0 190 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CEP170P1Q96L14 293 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TMEM59Q9BXS4 323 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 CALN1Q9BXU9 219 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 NAT10Q9H0A0 1025 aaKnown RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 TRABDQ9H4I3 376 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ASB7Q9H672 318 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 NMUR1Q9HB89 426 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 ABCB9Q9NP78 766 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 KRCC1Q9NPI7 259 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-205ENST00000424674 IFT46Q9NQC8 304 aa3.13□□□□□ -1.91
SF3B1-205ENST00000424674 XPNPEP1Q9NQW7 623 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms