RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CLPSP04118 112 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 ZBTB25P24278 435 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 NAAAQ02083 359 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 C10orf91Q5T1B1 145 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-204ENST00000424143 LYPD6Q86Y78 171 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 LINC00518Q8N0U6 118 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 ARMC10Q8N2F6 343 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 NKAIN3Q8N8D7 197 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 STOML3Q8TAV4 291 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 CDC6Q99741 560 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 PLA2G2FQ9BZM2 168 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 MS4A7Q9GZW8 240 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-204ENST00000424143 WSB2Q9NYS7 404 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-204ENST00000424143 DHDHQ9UQ10 334 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF175Q9Y473 711 aa13.73□□□□□ -0.21
C9orf3-204ENST00000424143 FANCMQ8IYD8 2048 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 TRBV23OR9-2A0A075B6M9 112 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 TRBV6-7A0A0A0MS04 114 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 A0A1B0GTH9 108 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 A0A1W2PQF6 199 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF736B4DX44 427 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 HRKO00198 91 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 SCDO00767 359 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 SCAMP1O15126 338 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 KDM4BO94953 1096 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 SPDEFO95238 335 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 TNFP01375 233 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 APOC3P02656 99 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ACHEP22303 614 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 CD34P28906 385 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 CTAG1AP78358 180 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 OC90Q02509 493 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 DHRS2Q13268 280 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ASPHD2Q6ICH7 369 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 DEGS2Q6QHC5 323 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 LYG2Q86SG7 212 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 SHISA5Q8N114 240 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 OR51A4Q8NGJ6 313 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF519Q8TB69 540 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 MITD1Q8WV92 249 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ASB5Q8WWX0 329 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 AQP3Q92482 292 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 C8orf44Q96CB5 159 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 LRRC46Q96FV0 321 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 FAM117AQ9C073 453 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 CAPN10Q9HC96 672 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 TAS2R3Q9NYW6 316 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 FBLN5Q9UBX5 448 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 A0A1W2PQD3 144 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 PRSS37A4D1T9 235 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 OR14I1A6ND48 311 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 F8VVB4 439 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 F8VWA3 439 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 AKT2P31751 481 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 CCKBRP32239 447 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 RIDAP52758 137 aaKnown RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 UBE2MP61081 183 aaKnown RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 SGCBQ16585 318 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 MEP1BQ16820 701 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 PNLIPRP3Q17RR3 467 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 YOD1Q5VVQ6 348 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF813Q6ZN06 617 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 MAMDC2Q7Z304 686 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-204ENST00000424143 OR2W3Q7Z3T1 314 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 RD3Q7Z3Z2 195 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 OR13C8Q8NGS7 320 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 OR6S1Q8NH40 331 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 TAAR8Q969N4 342 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 SLC46A1Q96NT5 459 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 GMEB2Q9UKD1 530 aa13.72□□□□□ -0.21
C9orf3-204ENST00000424143 MYO7AQ13402 2215 aa13.71□□□□□ -0.21
C9orf3-204ENST00000424143 IGLV1-36A0A0B4J1U3 117 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 XKRYO14609 159 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 SRSF10O75494 262 aaKnown RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 AMY2AP04746 511 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 F13BP05160 661 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 ARRB1P49407 418 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 RPL27P61353 136 aaKnown RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 DCAF7P61962 342 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 PPIAP62937 165 aaKnown RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 PMPCAQ10713 525 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 SNTB1Q13884 538 aaKnown RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 ELOCQ15369 112 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 CD226Q15762 336 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 ATRAIDQ6UW56 229 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 C5orf46Q6UWT4 87 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 ZNF704Q6ZNC4 412 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 BPIFB2Q8N4F0 458 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 C19orf47Q8N9M1 422 aaKnown RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 DTWD2Q8NBA8 298 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 BPIFCQ8NFQ6 507 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 ATOH1Q92858 354 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 KTI12Q96EK9 354 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-204ENST00000424143 CHRNA10Q9GZZ6 450 aa13.71□□□□□ -0.22
C9orf3-204ENST00000424143 SYT4Q9H2B2 425 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms