RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TRIP10Q15642 601 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 ZIK1Q3SY52 487 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-202ENST00000422544 FAM27BQ5VT28 67 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 LPCAT4Q643R3 524 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 UGT2A3Q6UWM9 527 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 MDP1Q86V88 176 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 GLB1L2Q8IW92 636 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 CCDC36Q8IYA8 594 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 OR51L1Q8NGJ5 315 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 OR9Q1Q8NGQ5 310 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 ZNRF4Q8WWF5 429 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NABP1Q96AH0 204 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 OTULINQ96BN8 352 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 PIK3IP1Q96FE7 263 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 SNX18Q96RF0 628 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 TEX12Q9BXU0 123 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 DCLRE1BQ9H816 532 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 MED20Q9H944 212 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NOX3Q9HBY0 568 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 SLC25A19Q9HC21 320 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 EMC7Q9NPA0 242 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NGBQ9NPG2 151 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 OBP2BQ9NPH6 170 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 CMC2Q9NRP2 79 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 B3GNT2Q9NY97 397 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF224Q9NZL3 707 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NPAP1Q9NZP6 1156 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NKX1-2Q9UD57 310 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-202ENST00000422544 ORC6Q9Y5N6 252 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 HRNRQ86YZ3 2850 aaPredicted RBP8.08□□□□□ -1.12
PDGFC-202ENST00000422544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.08□□□□□ -1.12
PDGFC-202ENST00000422544 FAM221AA4D161 298 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ZAR1LA6NP61 321 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 RRP9O43818 475 aaKnown RBP8.08□□□□□ -1.12
PDGFC-202ENST00000422544 CTAG2O75638 210 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 HRGP04196 525 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 GYPBP06028 91 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 CLUP10909 449 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 CBR1P16152 277 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ZNF3P17036 446 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 MSR1P21757 451 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 SLC25A1P53007 311 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 RAB1AP62820 205 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 SNAPC1Q16533 368 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 GSG1Q2KHT4 349 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 NRN1LQ496H8 165 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 BEX5Q5H9J7 111 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 SLX4IPQ5VYV7 408 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 PLBD1Q6P4A8 553 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 DNM1P34Q6PK57 102 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 FOXL2NBQ6ZUU3 175 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 SSX8Q7RTT4 187 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 SLC16A14Q7RTX9 510 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ZBTB46Q86UZ6 589 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 GALNT4Q8N4A0 578 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 PROKR2Q8NFJ6 384 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 OR2T4Q8NH00 348 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 C11orf40Q8WZ69 217 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 PTP4A1Q93096 173 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 FBXO17Q96EF6 278 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 C14orf79Q96F83 325 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 PLEKHA8Q96JA3 519 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 SLC38A2Q96QD8 506 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 HCAR1Q9BXC0 346 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 GABARAPL3Q9BY60 117 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 NMNAT2Q9BZQ4 307 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 RACGAP1Q9H0H5 632 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 KCNN2Q9H2S1 579 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 TOR3AQ9H497 397 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 RNF121Q9H920 327 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 POLE4Q9NR33 117 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 RASSF1Q9NS23 344 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ENOPH1Q9UHY7 261 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 FKBP7Q9Y680 259 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ABCA4P78363 2273 aa8.08□□□□□ -1.12
PDGFC-202ENST00000422544 ANK3Q12955 4377 aaKnown RBP8.08□□□□□ -1.12
PDGFC-202ENST00000422544 IGHV1-18A0A0C4DH31 117 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 M0R129 80 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 TLX2O43763 284 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-202ENST00000422544 PRKYO43930 277 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 UBL3O95164 117 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 SNAP29O95721 258 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 PLAUP00749 431 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 HLA-DQA2P01906 255 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 TFP02787 698 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 CELA3BP08861 270 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 GAAP10253 952 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 SPI1P17947 270 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 PAICSP22234 425 aaKnown RBP8.07□□□□□ -1.12
PDGFC-202ENST00000422544 CD40P25942 277 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 LOXP28300 417 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-202ENST00000422544 PEX2P28328 305 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 SSTR2P30874 369 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 ARR3P36575 388 aa8.07□□□□□ -1.12
PDGFC-202ENST00000422544 PTDSS1P48651 473 aaKnown RBP8.07□□□□□ -1.12
PDGFC-202ENST00000422544 IDH3GP51553 393 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-202ENST00000422544 RAD23AP54725 363 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms