RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 DMXL2Q8TDJ6 3036 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ATMQ13315 3056 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 GATBO75879 557 aaKnown RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 STK17BO94768 372 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 DKK1O94907 266 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 MT-ND4P03905 459 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 FAM157BP0CG42 384 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 PRKAR1AP10644 381 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 SLC2A1P11166 492 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 TCN2P20062 427 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 HOXD11P31277 338 aaPredicted RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 EFNB2P52799 333 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 HSF2Q03933 536 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 SMUG1Q53HV7 270 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 TMEM225Q6GV28 225 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 NDUFAF7Q7L592 441 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 LINGO2Q7L985 606 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 SIAH3Q8IW03 269 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 TMEM156Q8N614 296 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 MFSD8Q8NHS3 518 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 SLC22A8Q8TCC7 542 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 RPS4Y2Q8TD47 263 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 OIT3Q8WWZ8 545 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 KIAA1143Q96AT1 154 aaPredicted RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 C4orf45Q96LM5 186 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 CHST11Q9NPF2 352 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 VSX1Q9NZR4 365 aaPredicted RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 TEKT2Q9UIF3 430 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 PCDHGA9Q9Y5G4 932 aaKnown RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 ALG5Q9Y673 324 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 V9GY05 133 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 A0A1W2PNU3 283 aaPredicted RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 M0R296 226 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 GPRIN2O60269 458 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 DPP4P27487 766 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 MC2RQ01718 297 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 Q0VFX4 171 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 TMEM255AQ5JRV8 349 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 PEAR1Q5VY43 1037 aaPredicted RBP7.86□□□□□ -1.15
SNCA-206ENST00000420646 SLC18B1Q6NT16 456 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 PLXDC2Q6UX71 529 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 MISPQ8IVT2 679 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 ZNF679Q8IYX0 411 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 BEST4Q8NFU0 473 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 SLC26A10Q8NG04 563 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 OR51D1Q8NGF3 324 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 OR51A2Q8NGJ7 313 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 CAPSLQ8WWF8 208 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 TTC9Q92623 222 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 YIPF5Q969M3 257 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 ITPKCQ96DU7 683 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 DCBLD2Q96PD2 775 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 KCNK17Q96T54 332 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 PROK2Q9HC23 129 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 NKIRAS2Q9NYR9 191 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 OTOGLQ3ZCN5 2332 aa7.86□□□□□ -1.15
SNCA-206ENST00000420646 NSG1A0A0A6YYJ2 146 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 MEIS3P1A6NDR6 274 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 C9J4A7 227 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 HLA-DQB1P01920 261 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 GIFP27352 417 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 RBMS1P29558 406 aaKnown RBP7.85□□□□□ -1.15
SNCA-206ENST00000420646 BTCP35070 178 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 DNASE1L1P49184 302 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 BCL2L15Q5TBC7 163 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 OR2Y1Q8NGV0 311 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 SYNPRQ8TBG9 265 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 KCTD12Q96CX2 325 aaKnown RBP7.85□□□□□ -1.15
SNCA-206ENST00000420646 UCN2Q96RP3 112 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 CMKLR1Q99788 373 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 SOX7Q9BT81 388 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 PLSCR3Q9NRY6 295 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 NUDT15Q9NV35 164 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 SPATA2Q9UM82 520 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 LOXL2Q9Y4K0 774 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 IGF2RP11717 2491 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 A0A1W2PPL8 197 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 DCDC2BA2VCK2 349 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 A6NL46 340 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 AIPO00170 330 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 ITGA5P08648 1049 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 SP9P0CG40 484 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 ZNF823P16415 610 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 RFC3P40938 356 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 EGR3Q06889 387 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 SF3B4Q15427 424 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNCA-206ENST00000420646 RAET1LQ5VY80 246 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 SFRP4Q6FHJ7 346 aaPredicted RBP7.85□□□□□ -1.15
SNCA-206ENST00000420646 OR10K2Q6IF99 312 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 ZNF544Q6NX49 715 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 BIVMQ86UB2 503 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 LRRTM1Q86UE6 522 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 OR52I2Q8NH67 350 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 GPR148Q8TDV2 347 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 C11orf40Q8WZ69 217 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 MRPL48Q96GC5 212 aaKnown RBP7.85□□□□□ -1.15
SNCA-206ENST00000420646 IER2Q9BTL4 223 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 COMMD4Q9H0A8 199 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 ZCCHC4Q9H5U6 513 aa7.85□□□□□ -1.15
SNCA-206ENST00000420646 NEK6Q9HC98 313 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms