RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ERVS71-1P61550 626 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 CD47Q08722 323 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 SGCAQ16586 387 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 MOGQ16653 247 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 KRTAP24-1Q3LI83 254 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 PABPC1L2AQ5JQF8 200 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 THEM4Q5T1C6 240 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 TMEM154Q6P9G4 183 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 SLC25A47Q6Q0C1 308 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 RINLQ6ZS11 566 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 TRPM8Q7Z2W7 1104 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 CPEB3Q8NE35 698 aaKnown RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 SNX33Q8WV41 574 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 NSMAFQ92636 917 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 YIPF5Q969M3 257 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 NABP1Q96AH0 204 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 SLC7A6OSQ96CW6 309 aaPredicted RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 NMD3Q96D46 503 aaKnown RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 BPIFA2Q96DR5 249 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 NSL1Q96IY1 281 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 TSPAN32Q96QS1 320 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 RBP7Q96R05 134 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 ALG12Q9BV10 488 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 FNDC11Q9BVV2 318 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 RACGAP1Q9H0H5 632 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 OR51B6Q9H340 312 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 CCNB1IP1Q9NPC3 277 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 HINT3Q9NQE9 182 aaKnown RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 ZNF275Q9NSD4 429 aaPredicted RBP8.07□□□□□ -1.12
NUP50-205ENST00000419387 SLCO1C1Q9NYB5 712 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 NKIRAS2Q9NYR9 191 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 TAS2R1Q9NYW7 299 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 UGT2A1Q9Y4X1 527 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 MXRA5Q9NR99 2828 aa8.07□□□□□ -1.12
NUP50-205ENST00000419387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.06□□□□□ -1.128e-12■■■■■ 36
NUP50-205ENST00000419387 J3KTA2 159 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 PPIHO43447 177 aaKnown RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 NCR1O76036 304 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 UBOX5O94941 541 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 IGHMP01871 453 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 IFNW1P05000 195 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 SAGP10523 405 aaPredicted RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 ZNF32P17041 273 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 MAKP20794 623 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 PCMT1P22061 227 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 FUT4P22083 530 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 CCNOP22674 350 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 STOMP27105 288 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 GUCA1AP43080 201 aaPredicted RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 MAGEB1P43366 347 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 YAP1P46937 504 aaKnown RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 GSK3BP49841 420 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 SLC7A2P52569 658 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 CTXN1P60606 82 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 LIPEQ05469 1076 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 PRKCDQ05655 676 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 FMODQ06828 376 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 TOP3AQ13472 1001 aaPredicted RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 TRAM2Q15035 370 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 PCGF3Q3KNV8 242 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 FAM27BQ5VT28 67 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 TSEN54Q7Z6J9 526 aaKnown RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 ARPINQ7Z6K5 226 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 VTCN1Q7Z7D3 282 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 LRRC75AQ8NAA5 344 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 ICA1LQ8NDH6 482 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 OR1J1Q8NGS3 322 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 CLDND2Q8NHS1 167 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 FNDC8Q8TC99 324 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 POM121L2Q96KW2 1035 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 ZNF416Q9BWM5 594 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 RHCGQ9UBD6 479 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 EIF3KQ9UBQ5 218 aaKnown RBP8.06□□□□□ -1.12
NUP50-205ENST00000419387 SNX13Q9Y5W8 968 aa8.06□□□□□ -1.12
NUP50-205ENST00000419387 LOC100509620A0A075B734 347 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 A0A087WUU8 490 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 EFCAB9A8MZ26 197 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 B2RBV5 119 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 CXCR6O00574 342 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 FFAR1O14842 300 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 WNT9BO14905 357 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 GSTA4O15217 222 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 RP2O75695 350 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 ZNF682O95780 498 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 IGHV3-13P01766 116 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 TFP02787 698 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 MT-ND5P03915 603 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 CST2P09228 141 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 GAAP10253 952 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 GCH1P30793 250 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 MSX2P35548 267 aaPredicted RBP8.05□□□□□ -1.12
NUP50-205ENST00000419387 SRP14P37108 136 aaKnown RBP8.05□□□□□ -1.12
NUP50-205ENST00000419387 WNT5AP41221 380 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 CRYBB2P43320 205 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 SLC9A3P48764 834 aa8.05□□□□□ -1.12
NUP50-205ENST00000419387 GDI2P50395 445 aaKnown RBP8.05□□□□□ -1.12
NUP50-205ENST00000419387 ERVK-25P63136 954 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms