RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 FBXO17Q96EF6 278 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 MS4A3Q96HJ5 214 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 TSSK2Q96PF2 358 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 RAB3IPQ96QF0 476 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-204ENST00000418628 RBM4Q9BWF3 364 aaKnown RBP16.17■□□□□ 0.18
PTCD3-204ENST00000418628 MOKQ9UQ07 419 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 FKBP7Q9Y680 259 aa16.17■□□□□ 0.18
PTCD3-204ENST00000418628 SLC16A7O60669 478 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 TMCC2O75069 709 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 KHDRBS3O75525 346 aaKnown RBP16.16■□□□□ 0.18
PTCD3-204ENST00000418628 RAB36O95755 333 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 SERPINA5P05154 406 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 ZNF35P13682 527 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 OSMP13725 252 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 LAP3P28838 519 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 NOS3P29474 1203 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 CRABP1P29762 137 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 NKX6-1P78426 367 aaPredicted RBP16.16■□□□□ 0.18
PTCD3-204ENST00000418628 NPRL3Q12980 569 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 SLC22A25Q6T423 547 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 AMIGO2Q86SJ2 522 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 JAZF1Q86VZ6 243 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 HIPK1Q86Z02 1210 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 OR6V1Q8N148 313 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 SVOPLQ8N434 492 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 LRRC18Q8N456 261 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 NUP37Q8NFH4 326 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 IL17RDQ8NFM7 739 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 OR52E2Q8NGJ4 325 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 TEX47Q8TBZ9 253 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 CENPNQ96H22 339 aaPredicted RBP16.16■□□□□ 0.18
PTCD3-204ENST00000418628 WACQ9BTA9 647 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 ZNF416Q9BWM5 594 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 NMNAT2Q9BZQ4 307 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 GRIP2Q9C0E4 1043 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 CXXC4Q9H2H0 198 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 CISD1Q9NZ45 108 aaKnown RBP16.16■□□□□ 0.18
PTCD3-204ENST00000418628 EDARQ9UNE0 448 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 B9D1Q9UPM9 204 aa16.16■□□□□ 0.18
PTCD3-204ENST00000418628 FLNAP21333 2647 aaKnown RBP16.16■□□□□ 0.18
PTCD3-204ENST00000418628 A0A1W2PPL8 197 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 RENP00797 406 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 CRYAAP02489 173 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 SOD3P08294 240 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 PAX1P15863 534 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 ZNF32P17041 273 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 DNASE1P24855 282 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 GRK5P34947 590 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 ARHGDIAP52565 204 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 HGFACQ04756 655 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 RAB39AQ14964 217 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 SLC35F1Q5T1Q4 408 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 KDM4DQ6B0I6 523 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 C11orf71Q6IPW1 123 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 TMEM53Q6P2H8 277 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 DNM1P34Q6PK57 102 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 UGT2A3Q6UWM9 527 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 SYT9Q86SS6 491 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 GLB1L2Q8IW92 636 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 SLC37A3Q8NCC5 494 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 DHRS9Q9BPW9 319 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 FN3KQ9H479 309 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 SLC25A19Q9HC21 320 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 RPRD1BQ9NQG5 326 aaKnown RBP16.15■□□□□ 0.18
PTCD3-204ENST00000418628 CMC2Q9NRP2 79 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 COA3Q9Y2R0 106 aaPredicted RBP16.15■□□□□ 0.18
PTCD3-204ENST00000418628 F8P00451 2351 aa16.15■□□□□ 0.18
PTCD3-204ENST00000418628 OVOL3O00110 214 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 SNAP29O95721 258 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 CD8AP01732 235 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 LSM6P62312 80 aaKnown RBP16.14■□□□□ 0.17
PTCD3-204ENST00000418628 PPP2R2BQ00005 443 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 CDK5Q00535 292 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 DBPQ10586 325 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-204ENST00000418628 KEAP1Q14145 624 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 SGCAQ16586 387 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 DEFB113Q30KQ7 82 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF544Q6NX49 715 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 IQCF1Q8N6M8 205 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 ATG16L2Q8NAA4 619 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 SLC26A10Q8NG04 563 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 OR4F15Q8NGB8 312 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 CCL19Q99731 98 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 FOXC2Q99958 501 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 TRAF4Q9BUZ4 470 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-204ENST00000418628 C1orf198Q9H425 327 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF556Q9HAH1 456 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 EMC7Q9NPA0 242 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 BEX4Q9NWD9 120 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-204ENST00000418628 TMEFF2Q9UIK5 374 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-204ENST00000418628 KLHL21Q9UJP4 597 aa16.14■□□□□ 0.17
PTCD3-204ENST00000418628 G3V2T6 193 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 H3BN98 237 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 ZNF23P17027 643 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 TTKP33981 857 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 SLC25A1P53007 311 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 PSG4Q00888 419 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 CRMP1Q14194 572 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 PABPC1L2AQ5JQF8 200 aa16.13■□□□□ 0.17
PTCD3-204ENST00000418628 ACSM5Q6NUN0 579 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms