RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZCCHC24Q8N2G6 241 aaKnown RBP17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 BCAS4Q8TDM0 211 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 C10orf105Q8TEF2 133 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 ASB9Q96DX5 294 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 POM121L2Q96KW2 1035 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 ZNF570Q96NI8 536 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 RBP7Q96R05 134 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 BTBD10Q9BSF8 475 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 MAGIXQ9H6Y5 334 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 POLE4Q9NR33 117 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 GRHPRQ9UBQ7 328 aa17.73■□□□□ 0.43
PKNOX1-202ENST00000418336 UBOX5O94941 541 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 CST2P09228 141 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 NR2C1P13056 603 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 APEHP13798 732 aaKnown RBP17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 APEX1P27695 318 aaKnown RBP17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 KRR1Q13601 381 aaKnown RBP17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 RFX4Q33E94 735 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 TMEM255AQ5JRV8 349 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 TMEM53Q6P2H8 277 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 SMARCD3Q6STE5 483 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 MCUR1Q96AQ8 359 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 SLC7A8Q9UHI5 535 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 AURKCQ9UQB9 309 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 CMAHPQ9Y471 501 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 IER3IP1Q9Y5U9 82 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 ABCA1O95477 2261 aa17.72■□□□□ 0.43
PKNOX1-202ENST00000418336 DCTN6O00399 190 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 ICMTO60725 284 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 BMP4P12644 408 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 WNT5AP41221 380 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 ERVS71-1P61550 626 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 DBPQ10586 325 aaPredicted RBP17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 SGCAQ16586 387 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 GPR139Q6DWJ6 353 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 DHFR2Q86XF0 187 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 ZNF416Q9BWM5 594 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 TRIM15Q9C019 465 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 OR2H1Q9GZK4 316 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 SYT4Q9H2B2 425 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 OR52D1Q9H346 318 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 C1orf198Q9H425 327 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 RNF121Q9H920 327 aa17.71■□□□□ 0.43
PKNOX1-202ENST00000418336 IGLV3-9A0A075B6K5 115 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 FAM171A2A8MVW0 826 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 ARPC3O15145 178 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 MSR1P21757 451 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 DSCR9P59020 149 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 TSPAN31Q12999 210 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 ZNF620Q6ZNG0 422 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 ZNF101Q8IZC7 436 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 OR9Q2Q8NGE9 314 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 AKR7LQ8NHP1 331 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 FANK1Q8TC84 345 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 EMC7Q9NPA0 242 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 CUBNO60494 3623 aa17.7■□□□□ 0.42
PKNOX1-202ENST00000418336 OR10H3O60404 316 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 KRT36O76013 467 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 PPP1R3DO95685 299 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 TP53P04637 393 aaPredicted RBP17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 FAM157BP0CG42 384 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 ZNF250P15622 560 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 PCSK6P29122 969 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 PPP1R8Q12972 351 aaKnown RBP17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 CLEC2AQ6UVW9 174 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 ADCK1Q86TW2 530 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 ADGRG5Q8IZF4 528 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 FOXN4Q96NZ1 517 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 DDOQ99489 341 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 SYT3Q9BQG1 590 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 RHNO1Q9BSD3 238 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 NUAK2Q9H093 628 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 KRCC1Q9NPI7 259 aaPredicted RBP17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 FZR1Q9UM11 496 aa17.69■□□□□ 0.42
PKNOX1-202ENST00000418336 HIVEP2P31629 2446 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 IGLV1-36A0A0B4J1U3 117 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 A0A1W2PPL8 197 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 TNFRSF11BO00300 401 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 SOCS2O14508 198 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 MPZL1O95297 269 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 CLPTM1O96005 669 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 GASTP01350 101 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 GAAP10253 952 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 STOMP27105 288 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 UCP2P55851 309 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 KCNMB1Q16558 191 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 TBC1D28Q2M2D7 210 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 ZNF362Q5T0B9 420 aaPredicted RBP17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 OTPQ5XKR4 325 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 ZNF774Q6NX45 483 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 SYT9Q86SS6 491 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 OR8D4Q8NGM9 314 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 GNPDA2Q8TDQ7 276 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 FAM168AQ92567 244 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 SAMD8Q96LT4 415 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 TSSK2Q96PF2 358 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 VRK1Q99986 396 aaPredicted RBP17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 THTPAQ9BU02 230 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 PLA2G12AQ9BZM1 189 aa17.68■□□□□ 0.42
PKNOX1-202ENST00000418336 SPEF1Q9Y4P9 236 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms