RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 LEFTY1O75610 366 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF432O94892 652 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 YIF1AO95070 293 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ELFN1P0C7U0 828 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 S100A2P29034 98 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 DUSP5Q16690 384 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 TXNDC8Q6A555 127 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 FAHD2BQ6P2I3 314 aaPredicted RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 CMTM8Q8IZV2 173 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 OR7G2Q8NG99 324 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 OR2L2Q8NH16 312 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 SECTM1Q8WVN6 248 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 FAHD2AQ96GK7 314 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 TMEM68Q96MH6 324 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 NMNAT2Q9BZQ4 307 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 FN3KRPQ9HA64 309 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 PRDM7Q9NQW5 492 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 PARPBPQ9NWS1 579 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A0C4DFX4 3053 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1B0GVT2 93 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1W2PPV9 198 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 C5orf51A6NDU8 294 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 URADA6NGE7 173 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 C1QTNF3-AMACRE9PGA6 284 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 PRAMEF26H0Y7S4 382 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 AGPAT2O15120 278 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 GRM6O15303 877 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ERI3O43414 337 aaKnown RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 DNAJB6O75190 326 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 NDUFB2O95178 105 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 IFNA2P01563 188 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 IFNA17P01571 189 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 SPTBP11277 2137 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 CD1CP29017 333 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 TACR3P29371 465 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MAS1LP35410 378 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 RAB11BQ15907 218 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 EIF5AL1Q6IS14 154 aaKnown RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF619Q8N2I2 560 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZDHHC22Q8N966 263 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 OR2G2Q8NGZ5 317 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ASB17Q8WXJ9 295 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MCHR2Q969V1 340 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 NMNAT3Q96T66 252 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 PRRT1Q99946 306 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 NRSN2Q9GZP1 204 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF350Q9GZX5 532 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 GAR1Q9NY12 217 aaKnown RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MRM2Q9UI43 246 aaKnown RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 KCNE5Q9UJ90 142 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ATXN7L1Q9ULK2 861 aaPredicted RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF780BQ9Y6R6 833 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 TRIOO75962 3097 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MSGN1A6NI15 193 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 OR4C45A6NMZ5 311 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 H0YIZ8 118 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC17A2O00624 439 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 BCAT2O15382 392 aaPredicted RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 LRP3O75074 770 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 DUS4LO95620 317 aaKnown RBP7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 NGFRP08138 427 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF28P17035 718 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 PBX2P40425 430 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MEF2DQ14814 521 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 TPGS2Q68CL5 300 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 KCTD9Q7L273 389 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 NRSN1Q8IZ57 195 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 VN1R2Q8NFZ6 395 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 OR56B1Q8NGI3 324 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 OR10AC1Q8NH08 325 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 GRHL3Q8TE85 626 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MRGPRFQ96AM1 343 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 VWCEQ96DN2 955 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MS4A6EQ96DS6 147 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MENTQ9BUN1 341 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 LMAN1LQ9HAT1 526 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 PARP11Q9NR21 331 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 KCNG2Q9UJ96 466 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 YIPF1Q9Y548 306 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A0B4J2E0 115 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1B0GX12 115 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ABHD16AO95870 558 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 IFNA10P01566 189 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 STATHP02808 62 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ADH1AP07327 375 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC2A1P11166 492 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 DAOP14920 347 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SERPINF1P36955 418 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 MAP3K8P41279 467 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CX3CR1P49238 355 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 SKP1P63208 163 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 CYCSP99999 105 aaKnown RBP7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 KCNAB1Q14722 419 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ZIC1Q15915 447 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 FAM166AQ6J272 317 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 ABHD17CQ6PCB6 329 aa7.25□□□□□ -1.25
HMGXB4-202ENST00000418170 OR51A4Q8NGJ6 313 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms