RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MOV10Q9HCE1 1003 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 EMC7Q9NPA0 242 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 NGBQ9NPG2 151 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 POLE4Q9NR33 117 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF226Q9NYT6 803 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 JKAMPQ9P055 326 aa7.44□□□□□ -1.22
TRIM48-201ENST00000417545 WARS2Q9UGM6 360 aaKnown RBP7.44□□□□□ -1.22
TRIM48-201ENST00000417545 RP1L1Q8IWN7 2480 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 IGLV1-36A0A0B4J1U3 117 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 IGKV1D-43A0A0B4J1Z2 117 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 IQCMA0A1B0GVH7 501 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 A0A1W2PR80 420 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 IRGMA1A4Y4 181 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 A1L4Q6 167 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SH3D21A4FU49 640 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 TUBAL3A6NHL2 446 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 DLGAP1O14490 977 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ENTPD6O75354 484 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 GPANK1O95872 356 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 CST2P09228 141 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ARR3P36575 388 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 NAA10P41227 235 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ENTPD1P49961 510 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF133P52736 654 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 NUDT6P53370 316 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 FOXG1P55316 489 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SORDQ00796 357 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SCRN3Q0VDG4 424 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 POU4F2Q12837 409 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 MED21Q13503 144 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 AQP6Q13520 282 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 MAD2L1BPQ15013 274 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 TAF13Q15543 124 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 GABRA6Q16445 453 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 GSG1Q2KHT4 349 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 FBXL19-AS1Q494R0 122 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 TIMM23BQ5SRD1 257 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 TMEM154Q6P9G4 183 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SHFQ7M4L6 423 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SSX8Q7RTT4 187 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 P2RY8Q86VZ1 359 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ALDH16A1Q8IZ83 802 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 OR51G2Q8NGK0 314 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 CNIH3Q8TBE1 160 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 C11orf40Q8WZ69 217 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 HSD17B8Q92506 261 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 HTRA1Q92743 480 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 TFAP2CQ92754 450 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 MRPL48Q96GC5 212 aaKnown RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF582Q96NG8 517 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 MYCBPQ99417 103 aaPredicted RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 CNN2Q99439 309 aaKnown RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 HCAR1Q9BXC0 346 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 OBP2BQ9NPH6 170 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SLC17A5Q9NRA2 495 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 SCN3BQ9NY72 215 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 KCNG2Q9UJ96 466 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 LAMP5Q9UJQ1 280 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 FBXL3Q9UKT7 428 aa7.43□□□□□ -1.22
TRIM48-201ENST00000417545 RPL36Q9Y3U8 105 aaKnown RBP7.43□□□□□ -1.22
TRIM48-201ENST00000417545 DIDO1Q9BTC0 2240 aaKnown RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 FREM1Q5H8C1 2179 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 OR5H1A6NKK0 313 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 M0R1B8 84 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 DCTN6O00399 190 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 DOK2O60496 412 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 PTHP01270 115 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 HLA-HP01893 362 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 GNAO1P09471 354 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 PAX7P23759 505 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 HTR1FP30939 366 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 KIR2DL3P43628 341 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 MTNR1AP48039 350 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 LSM6P62312 80 aaKnown RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 TUBA1BP68363 451 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 TUBA4AP68366 448 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 PIGFQ07326 219 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 TMED1Q13445 227 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 EIF2B1Q14232 305 aaKnown RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 OCLNQ16625 522 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 MEP1BQ16820 701 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 NRN1LQ496H8 165 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF362Q5T0B9 420 aaPredicted RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 MEX3BQ6ZN04 569 aaKnown RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 TUBA1AQ71U36 451 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 LINC00346Q8IVM7 164 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF511Q8NB15 262 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 SLC26A10Q8NG04 563 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 THEM6Q8WUY1 208 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 BCL2L2Q92843 193 aaPredicted RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 PTP4A1Q93096 173 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 UBE2FQ969M7 185 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 NMD3Q96D46 503 aaKnown RBP7.42□□□□□ -1.22
TRIM48-201ENST00000417545 RNFT2Q96EX2 444 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 TEAD3Q99594 435 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 ZNF416Q9BWM5 594 aa7.42□□□□□ -1.22
TRIM48-201ENST00000417545 ANKRD60Q9BZ19 345 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms