RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 MEPEQ9NQ76 525 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 MMP26Q9NRE1 261 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 CYSLTR2Q9NS75 346 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ZNF69Q9UC07 566 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PURGQ9UJV8 347 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NUP50Q9UKX7 468 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 AUP1Q9Y679 476 aa12.05□□□□□ -0.48
HLA-DQB2-229ENST00000411527 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 TRAPPC2LH3BP13 241 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 TGDSO95455 350 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ADH4P08319 380 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 FUT1P19526 365 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 CD247P20963 164 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 LIPAP38571 399 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 AQP2P41181 271 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 DAP3P51398 398 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ZNF133P52736 654 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PPP1CBP62140 327 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ERVK-25P63136 954 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PSG4Q00888 419 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 BAMBIQ13145 260 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 HNRNPA0Q13151 305 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 HDDC2Q7Z4H3 204 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 BCL6BQ8N143 479 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ABHD4Q8TB40 342 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 SLC26A7Q8TE54 656 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NSMAFQ92636 917 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NABP1Q96AH0 204 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 DIRC2Q96SL1 478 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 CCDC28BQ9BUN5 200 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 UNKLQ9H9P5 680 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 MSL2Q9HCI7 577 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NPHS2Q9NP85 383 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 INIPQ9NRY2 104 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PLEK2Q9NYT0 353 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 EGFL7Q9UHF1 273 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 KLHL21Q9UJP4 597 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 RAB21Q9UL25 225 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 UGT2A1Q9Y4X1 527 aa12.04□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ERLIN1O75477 346 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NGFP01138 241 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 IGHV2-70P01814 119 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 MT-ND1P03886 318 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 RBMXP38159 391 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 MTPNP58546 118 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 TNFAIP6P98066 277 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 DEFA6Q01524 100 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 FMODQ06828 376 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ZNF154Q13106 437 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 SELPLGQ14242 412 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PDLIM3Q53GG5 364 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 TREML4Q6UXN2 200 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 RFPL4BQ6ZWI9 263 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PATL1Q86TB9 770 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 C1orf174Q8IYL3 243 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ALDH16A1Q8IZ83 802 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 KLHL36Q8N4N3 616 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 C7orf26Q96N11 449 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 NANOGQ9H9S0 305 aa12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ZMAT3Q9HA38 289 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 STX18Q9P2W9 335 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 CGGBP1Q9UFW8 167 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB2-229ENST00000411527 IGKV1D-43A0A0B4J1Z2 117 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR7A10O76100 309 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 IGHMP01871 453 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CD55P08174 381 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 CD47Q08722 323 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LAPTM4AQ15012 233 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ARMC4Q5T2S8 1044 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 FAM27BQ5VT28 67 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 DHDDSQ86SQ9 333 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NKAIN4Q8IVV8 208 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 MOSPD2Q8NHP6 518 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PFN4Q8NHR9 129 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 HDAC2Q92769 488 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TAMM41Q96BW9 452 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 NMD3Q96D46 503 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SGTBQ96EQ0 304 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZNF48Q96MX3 618 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 OR2H1Q9GZK4 316 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 SMURF2Q9HAU4 748 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 PATZ1Q9HBE1 687 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 POLR3KQ9Y2Y1 108 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 INSIG2Q9Y5U4 225 aa12.02□□□□□ -0.49
HLA-DQB2-229ENST00000411527 TIMM8AO60220 97 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 RNASE1P07998 156 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 ZNF12P17014 697 aa12.01□□□□□ -0.49
HLA-DQB2-229ENST00000411527 LAP3P28838 519 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms