RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PEX16Q9Y5Y5 336 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 ANKRD12Q6UB98 2062 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.94□□□□□ -2.1
PMS1-203ENST00000409593 ATP10AO60312 1499 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 ADAMTS13Q76LX8 1427 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 BTBD17A6NE02 478 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 GCM2O75603 506 aaPredicted RBP1.93□□□□□ -2.1
PMS1-203ENST00000409593 DESP17661 470 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 DTYMKP23919 212 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 SLC39A6Q13433 755 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 IMMTQ16891 758 aaKnown RBP1.93□□□□□ -2.1
PMS1-203ENST00000409593 ZFP1Q6P2D0 407 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 STEAP2Q8NFT2 490 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 LINC01560Q8TB33 94 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 FLYWCH2Q96CP2 140 aaKnown RBP1.93□□□□□ -2.1
PMS1-203ENST00000409593 TBC1D31Q96DN5 1066 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 ZNF717Q9BY31 904 aaPredicted RBP1.93□□□□□ -2.1
PMS1-203ENST00000409593 C15orf38-AP3S2A0A0A6YYH1 394 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 H0YCG3 227 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 UBXN8O00124 270 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 MTX2O75431 263 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 IGHDP01880 384 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 CD34P28906 385 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 ACTG2P63267 376 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 MEF2BQ02080 365 aaPredicted RBP1.93□□□□□ -2.1
PMS1-203ENST00000409593 ECH1Q13011 328 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 PPIL2Q13356 520 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 THEM4Q5T1C6 240 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 CCNJQ5T5M9 372 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 H2BFWTQ7Z2G1 175 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 OR4K5Q8NGD3 323 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 C12orf42Q96LP6 360 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 FN3KRPQ9HA64 309 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 CTNNA3Q9UI47 895 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 SIGLEC9Q9Y336 463 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 TMED5Q9Y3A6 229 aa1.93□□□□□ -2.1
PMS1-203ENST00000409593 YIF1AO95070 293 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 FGGP02679 453 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 ATP1B2P14415 290 aaPredicted RBP1.92□□□□□ -2.1
PMS1-203ENST00000409593 CXCL12P48061 93 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 PRRX1P54821 245 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 TMEM205Q6UW68 189 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 SLC25A48Q6ZT89 311 aaKnown RBP1.92□□□□□ -2.1
PMS1-203ENST00000409593 TGIF2LXQ8IUE1 241 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 EID2Q8N6I1 236 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 SDR9C7Q8NEX9 313 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 OR1L6Q8NGR2 347 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 CXorf40AQ8TE69 158 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 CLEC4AQ9UMR7 237 aa1.92□□□□□ -2.1
PMS1-203ENST00000409593 SHROOM3Q8TF72 1996 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 A0A0U1RQV1 116 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 A0A1W2PPV9 198 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 LGALS9O00182 355 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 BPY2O14599 106 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 CHST1O43916 411 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 HLA-DQA1P01909 254 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 RAB3BP20337 219 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 CASP14P31944 242 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 SEC61GP60059 68 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 ZNF616Q08AN1 781 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 TWF1Q12792 350 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 METTL21CQ5VZV1 264 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 AP1ARQ63HQ0 302 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 LRRC75A-AS1Q8N1F1 130 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 MIR7-3HGQ8N6C7 128 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 OR4F6Q8NGB9 312 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 OR9A2Q8NGT5 310 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 LILRB4Q8NHJ6 448 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 CNDP1Q96KN2 507 aa1.91□□□□□ -2.1
PMS1-203ENST00000409593 DPM1O60762 260 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 ETS2P15036 469 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 SSTR5P35346 364 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 IFNAR2P48551 515 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 YWHAGP61981 247 aaKnown RBP eCLIP1.9□□□□□ -2.1
PMS1-203ENST00000409593 IGFBP7Q16270 282 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 ORMDL2Q53FV1 153 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 UNQ9165/PRO28630Q6UXU0 137 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 FBXW12Q6X9E4 464 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 CCDC73Q6ZRK6 1079 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 EFL1Q7Z2Z2 1120 aaKnown RBP1.9□□□□□ -2.1
PMS1-203ENST00000409593 RHEBL1Q8TAI7 183 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 NTAN1Q96AB6 310 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 SERPINB12Q96P63 405 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 NPY6RQ99463 290 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 VCX2Q9H322 139 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 NT5MQ9NPB1 228 aa1.9□□□□□ -2.1
PMS1-203ENST00000409593 TMEM50AO95807 157 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 CCNB1P14635 433 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 WDFY1Q8IWB7 410 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 PDIK1LQ8N165 341 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 OR10J6PQ8NGY7 276 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 OR13G1Q8NGZ3 307 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 CIRBP-AS1Q8TBR5 109 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 ZNF488Q96MN9 340 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 TIMM17AQ99595 171 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 SLC39A3Q9BRY0 314 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 SGK2Q9HBY8 427 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 NPTNQ9Y639 398 aa1.9□□□□□ -2.11
PMS1-203ENST00000409593 CNTNAP1P78357 1384 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms