RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZNF474Q6S9Z5 364 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 FOXL2NBQ6ZUU3 175 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 C1orf162Q8NEQ5 155 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 BBS1Q8NFJ9 593 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 C14orf79Q96F83 325 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 CNBD2Q96M20 576 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 NELFAQ9H3P2 528 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 SEC61A2Q9H9S3 476 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 DNAJC27Q9NZQ0 273 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 KCNN3Q9UGI6 736 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 WARS2Q9UGM6 360 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 ENTPD6O75354 484 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 HRGP04196 525 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 PSMB1P20618 241 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 SSTR2P30874 369 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 HTR1FP30939 366 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 CD79BP40259 229 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 ARF1P84077 181 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 SFRP5Q5T4F7 317 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 C9orf135Q5VTT2 229 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 ANKRD16Q6P6B7 361 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNF813Q6ZN06 617 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNF627Q7L945 461 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 CXorf67Q86X51 503 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNF433Q8N7K0 673 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 OR51L1Q8NGJ5 315 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 CNIH3Q8TBE1 160 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 FBLIM1Q8WUP2 373 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 KISS1RQ969F8 398 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNF837Q96EG3 531 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 TEAD3Q99594 435 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 USB1Q9BQ65 265 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 SIAEQ9HAT2 523 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 TMEM38BQ9NVV0 291 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 UGT2A1Q9Y4X1 527 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 LRRC42Q9Y546 428 aa14.49□□□□□ -0.09
TSPAN4-208ENST00000409531 FAM171A2A8MVW0 826 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 WBP4O75554 376 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 LYZL6O75951 148 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 OR8G3PP0DMU2 310 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 MSR1P21757 451 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 IL32P24001 234 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 GSTT1P30711 240 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 HOXC12P31275 282 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 KIR2DL3P43628 341 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 CSNK2BP67870 215 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 POU4F2Q12837 409 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 CDK5R2Q13319 367 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 KCNMB1Q16558 191 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 C1QTNF12Q5T7M4 302 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 BCDIN3DQ7Z5W3 292 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 CCDC36Q8IYA8 594 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 C17orf78Q8N4C9 275 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 STEAP2Q8NFT2 490 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 OR10H5Q8NGA6 315 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 OR1K1Q8NGR3 316 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 APH1BQ8WW43 257 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 BOD1Q96IK1 185 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 KCNN2Q9H2S1 579 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 POLE4Q9NR33 117 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 GALNT8Q9NY28 637 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 HAO2Q9NYQ3 351 aa14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 RPL36Q9Y3U8 105 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-208ENST00000409531 GAAP10253 952 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 B4GALT1P15291 398 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNF823P16415 610 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 CDAP32320 146 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 MTNR1AP48039 350 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 FOXG1P55316 489 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 LSM6P62312 80 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 SORDQ00796 357 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 SNTB1Q13884 538 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 SGCAQ16586 387 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 LINC01590Q5TEZ4 76 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 FAM27BQ5VT28 67 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 STAC2Q6ZMT1 411 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 BHLHA15Q7RTS1 189 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 DPPA2Q7Z7J5 298 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 SLC22A24Q8N4F4 322 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 SLC26A10Q8NG04 563 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 ZMYND19Q96E35 227 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 WACQ9BTA9 647 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 OR10A4Q9H209 315 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 AASSQ9UDR5 926 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 KCNG2Q9UJ96 466 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 ABCA12Q86UK0 2595 aa14.47□□□□□ -0.09
TSPAN4-208ENST00000409531 CCDC182A6NF36 153 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 TUBAL3A6NHL2 446 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 C16orf97H3BN30 126 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 TMCC2O75069 709 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 RAD51DO75771 328 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 ATP6V1E1P36543 226 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 CXCR4P61073 352 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 TLE4Q04727 773 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 GGTLC2Q14390 218 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 GABRA6Q16445 453 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 KLHL24Q6TFL4 600 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 P2RY8Q86VZ1 359 aa14.46□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNRF4Q8WWF5 429 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms