RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 AKT2P31751 481 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 GABRA3P34903 492 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 NPBWR1P48145 328 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 RAB11BQ15907 218 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 LINC01590Q5TEZ4 76 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ARHGAP40Q5TG30 622 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 LEG1Q6P5S2 330 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 Q6ZSR6 202 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 USP53Q70EK8 1073 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF511Q8NB15 262 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 OR6S1Q8NH40 331 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 RLN3Q8WXF3 142 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 IKZF2Q9UKS7 526 aa13.98□□□□□ -0.17
LIMS2-205ENST00000409455 USP34Q70CQ2 3546 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 LOC100289279A0A1B0GTE1 492 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM212A6NML5 194 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 AKR7A3O95154 331 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 S100A8P05109 93 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 RAB5BP61020 215 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 FHL5Q5TD97 284 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 ULK3Q6PHR2 472 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 GALNT16Q8N428 558 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 FAM3DQ96BQ1 224 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 SLC17A5Q9NRA2 495 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 COL6A3P12111 3177 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 VCANP13611 3396 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 TRAV20A0A0B4J274 112 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 MEX3AA1L020 520 aaKnown RBP13.97□□□□□ -0.17
LIMS2-205ENST00000409455 FAM25EA8MYX2 175 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 C10orf142B7Z368 130 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 H3BSH0 61 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 PRICKLE3O43900 615 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-205ENST00000409455 LDB3O75112 727 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 CYB5AP00167 134 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 IGLV3-19P01714 112 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 TPT1P13693 172 aaKnown RBP13.97□□□□□ -0.17
LIMS2-205ENST00000409455 NR0B2Q15466 257 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 ODF4Q2M2E3 257 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 SCGB2B2Q4G0G5 96 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 GXYLT1Q4G148 440 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 JAZF1Q86VZ6 243 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF595Q8IYB9 648 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 FAM160A2Q8N612 972 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-205ENST00000409455 RNF141Q8WVD5 230 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 MNTQ99583 582 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF251Q9BRH9 671 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 PTDSS2Q9BVG9 487 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 TINAGL1Q9GZM7 467 aaPredicted RBP13.97□□□□□ -0.17
LIMS2-205ENST00000409455 KCNK15Q9H427 330 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 SLC22A11Q9NSA0 550 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 KLHDC2Q9Y2U9 406 aa13.97□□□□□ -0.17
LIMS2-205ENST00000409455 KNL1Q8NG31 2342 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 ITGA5P08648 1049 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 CFPP27918 469 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 ACAA2P42765 397 aaKnown RBP13.96□□□□□ -0.17
LIMS2-205ENST00000409455 ISXQ2M1V0 245 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 C2orf76Q3KRA6 126 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 PLEKHN1Q494U1 663 aaPredicted RBP13.96□□□□□ -0.17
LIMS2-205ENST00000409455 DEFB134Q4QY38 66 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 EXOSC6Q5RKV6 272 aaKnown RBP13.96□□□□□ -0.17
LIMS2-205ENST00000409455 ZCCHC12Q6PEW1 402 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 BIVMQ86UB2 503 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 OR13H1Q8NG92 308 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 OR51A4Q8NGJ6 313 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 OR10AC1Q8NH08 325 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 STOML3Q8TAV4 291 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 TPSD1Q9BZJ3 242 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 FOXQ1Q9C009 403 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 POLE3Q9NRF9 147 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 DNAJB12Q9NXW2 375 aaKnown RBP13.96□□□□□ -0.17
LIMS2-205ENST00000409455 HS3ST3A1Q9Y663 406 aa13.96□□□□□ -0.17
LIMS2-205ENST00000409455 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 A0A087WV62 115 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 A0A1B0GTH9 108 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 OR4C45A6NMZ5 311 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 P2RX6O15547 441 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 SLC35G6P0C7Q6 338 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 ABOP16442 354 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 PEBP1P30086 187 aaKnown RBP13.96□□□□□ -0.18
LIMS2-205ENST00000409455 PTGFRP43088 359 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 EMDP50402 254 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 PNLIPRP2P54317 469 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 YPEL5P62699 121 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 SRSF3P84103 164 aaKnown RBP13.96□□□□□ -0.18
LIMS2-205ENST00000409455 ALG11Q2TAA5 492 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 KIAA0895LQ68EN5 471 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 ZNF425Q6IV72 752 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 VN1R4Q7Z5H5 301 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 ZAR1Q86SH2 424 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 TSTD1Q8NFU3 115 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 OR5AP2Q8NGF4 316 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 OR2G2Q8NGZ5 317 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 ZCCHC10Q8TBK6 192 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 ELP5Q8TE02 316 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 TSEN15Q8WW01 171 aaKnown RBP13.96□□□□□ -0.18
LIMS2-205ENST00000409455 SEH1LQ96EE3 360 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 PIK3IP1Q96FE7 263 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 GUCD1Q96NT3 240 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 MMP26Q9NRE1 261 aa13.96□□□□□ -0.18
LIMS2-205ENST00000409455 UQCC1Q9NVA1 299 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms