RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 KLHL28Q9NXS3 571 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 NKIRAS1Q9NYS0 192 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 UBQLN1Q9UMX0 589 aaKnown RBP3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 GINS2Q9Y248 185 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 HES2Q9Y543 173 aa3.63□□□□□ -1.83
HMGB3P18-201ENST00000406327 TDRD15B5MCY1 1934 aaKnown RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 LOC285556D6RIA3 1793 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAPPA2Q9BXP8 1791 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 EXOC1LA0A1B0GW35 172 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 TCRBV9S1A1TA0A576 114 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 FRG2CA6NGY1 282 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 TCP11X1B4DZS4 312 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 GOLGA8MH3BSY2 632 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 H7C0C1 242 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 LYPLA1O75608 230 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 UPK3AO75631 287 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 CRYGBP07316 175 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 IGLL1P15814 213 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 GALP22466 123 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 WARSP23381 471 aaKnown RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 IL2RGP31785 369 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 PHBP35232 272 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 OPRD1P41143 372 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 ATP5OP48047 213 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 P2RY4P51582 365 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 LMO4P61968 165 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 TLE4Q04727 773 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 XRCC4Q13426 336 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 GNMTQ14749 295 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 AANATQ16613 207 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 RAET1LQ5VY80 246 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 RNASEKQ6P5S7 137 aaKnown RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 C4orf22Q6V702 233 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 MOB1BQ7L9L4 216 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 PPP1R27Q86WC6 154 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 C17orf82Q86X59 251 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 MARCH9Q86YJ5 346 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 PDIK1LQ8N165 341 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 SPATA3Q8NHX4 192 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 FAM172AQ8WUF8 416 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 DYDC1Q8WWB3 177 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 ST8SIA1Q92185 356 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 UFD1Q92890 307 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 MCUR1Q96AQ8 359 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 MAGEB18Q96M61 343 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 TSNARE1Q96NA8 513 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 RANBP9Q96S59 729 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 ATOH8Q96SQ7 321 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 MAPKAP1Q9BPZ7 522 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 SNRNP25Q9BV90 132 aaKnown RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 NSRP1Q9H0G5 558 aaKnown RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 TRABDQ9H4I3 376 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 ANKRD19PQ9H560 264 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZFP14Q9HCL3 533 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 GPATCH2LQ9NWQ4 482 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 PSMC3IPQ9P2W1 217 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 CSAG2Q9Y5P2 127 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 PARP14Q460N5 1801 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 CLUHO75153 1309 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 LOXHD1Q8IVV2 1947 aa3.62□□□□□ -1.83
HMGB3P18-201ENST00000406327 A0A1W2PPE3 182 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 SMCO3A2RU48 225 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 VSTM2BA6NLU5 285 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 C9JVG2 144 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 TRDMT1O14717 391 aaKnown RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 HCRTO43612 131 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 KLHL41O60662 606 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 HUS1O60921 280 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 SPAG7O75391 227 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF254O75437 659 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 BANF1O75531 89 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 OXSR1O95747 527 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 TAC1P20366 129 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 FOXN2P32314 431 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 HSD17B2P37059 387 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 MDH2P40926 338 aaKnown RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PTGDSP41222 190 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 MAGEA6P43360 314 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 TAF6P49848 677 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PRRX1P54821 245 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 BASP1P80723 227 aaKnown RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 BCL2L1Q07817 233 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 OXA1LQ15070 435 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 TMED2Q15363 201 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC1A5Q15758 541 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 MICBQ29980 383 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR52E8Q6IFG1 317 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PGAP1Q75T13 922 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 BZW1Q7L1Q6 419 aaKnown RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 STRADAQ7RTN6 431 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 PSTKQ8IV42 348 aaKnown RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 CDKL3Q8IVW4 592 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC39A11Q8N1S5 342 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF485Q8NCK3 441 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 FBXO36Q8NEA4 188 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 CATSPER1Q8NEC5 780 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR4C5Q8NGB2 326 aa3.61□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR13F1Q8NGS4 319 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms