RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR9K2Q8NGE7 335 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 OR51T1Q8NGJ9 327 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 FLVCR1-AS1Q8TAF5 88 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 OIT3Q8WWZ8 545 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 FGGYQ96C11 551 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 CTHRC1Q96CG8 243 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 DHRS1Q96LJ7 313 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 NGBQ9NPG2 151 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 TEX13DA0A0J9YY54 714 aaPredicted RBP8.19□□□□□ -1.1
LIG4-202ENST00000405925 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 NOTOA8MTQ0 251 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 HPGDSO60760 199 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 CLEC2LP0C7M8 214 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 UBCP0CG48 685 aaKnown RBP8.19□□□□□ -1.1
LIG4-202ENST00000405925 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
LIG4-202ENST00000405925 JUNBP17275 347 aaPredicted RBP8.19□□□□□ -1.1
LIG4-202ENST00000405925 PRSS3P35030 304 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 GP2P55259 537 aaKnown RBP8.19□□□□□ -1.1
LIG4-202ENST00000405925 CFHR1Q03591 330 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 CHRFAM7AQ494W8 412 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 USP51Q70EK9 711 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 TRILQ7L0X0 811 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 RDH10Q8IZV5 341 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 OR6V1Q8N148 313 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 CCDC107Q8WV48 283 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 PALMDQ9NP74 551 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 GLTPQ9NZD2 209 aa8.19□□□□□ -1.1
LIG4-202ENST00000405925 OR6C65A6NJZ3 312 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 FZD7O75084 574 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 CYC1P08574 325 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 SERPINA2P20848 420 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 SOX18P35713 384 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 MAGEA5P43359 124 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 CX3CR1P49238 355 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 MTCP1P56278 107 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 GRB2P62993 217 aaKnown RBP8.18□□□□□ -1.1
LIG4-202ENST00000405925 RNASE10Q5GAN6 216 aaKnown RBP8.18□□□□□ -1.1
LIG4-202ENST00000405925 ATP1A1-AS1Q5TC04 95 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 UBE2UQ5VVX9 321 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 COX15Q7KZN9 410 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ADGRG3Q86Y34 549 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ZNF679Q8IYX0 411 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 CASTOR1Q8WTX7 329 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 CAPSLQ8WWF8 208 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 DYNLRB1Q9NP97 96 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 DNAJB11Q9UBS4 358 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 PROCRQ9UNN8 238 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
LIG4-202ENST00000405925 IGHV1-45A0A0A0MS14 117 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ANKRD61A6NGH8 418 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 DISC1C4P0D8 188 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 M0R135 149 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 DLL1O00548 723 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 SERPINA5P05154 406 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ACAA2P42765 397 aaKnown RBP8.18□□□□□ -1.1
LIG4-202ENST00000405925 ZFP69Q49AA0 526 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 PYHIN1Q6K0P9 492 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 PGAP1Q75T13 922 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 TPRA1Q86W33 373 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 KIF18BQ86Y91 864 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 C17orf47Q8NEP4 570 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 FNDC9Q8TBE3 224 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 SYNPRQ8TBG9 265 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ZNF799Q96GE5 643 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 C12orf10Q9HB07 376 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 NRIP3Q9NQ35 241 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ZNF221Q9UK13 617 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 TECTAO75443 2155 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 C5orf51A6NDU8 294 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 INMT-MINDY4F8WBC2 141 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 TNFSF8P32971 234 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 CD96P40200 585 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 BCAP31P51572 246 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ATP1B3P54709 279 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 C3AR1Q16581 482 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 NKPD1Q17RQ9 610 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 YIF1BQ5BJH7 314 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 BAIAP2L2Q6UXY1 529 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 MKXQ8IYA7 352 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 NOXO1Q8NFA2 376 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 OR1J2Q8NGS2 313 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 C11orf40Q8WZ69 217 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 NINJ1Q92982 152 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 DMRTB1Q96MA1 342 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ATF6BQ99941 703 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 ABHD6Q9BV23 337 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 RNF167Q9H6Y7 350 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 SLC22A13Q9Y226 551 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 HIF3AQ9Y2N7 669 aa8.18□□□□□ -1.1
LIG4-202ENST00000405925 PIEZO1Q92508 2521 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 LOC107986453A0A1B0GWG9 222 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TRDV1A0A1B0GX56 115 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TSPAN2O60636 221 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 GUSBP08236 651 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ZNF35P13682 527 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 APEHP13798 732 aaKnown RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 ZNF44P15621 663 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 GABRR1P24046 479 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 BDKRB2P30411 391 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms