RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 THEM4Q5T1C6 240 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 OR6V1Q8N148 313 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SLAMF6Q96DU3 332 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 NIPAL2Q9H841 368 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 CGGBP1Q9UFW8 167 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 RTTNQ86VV8 2226 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 KLRC4-KLRK1H3BQV0 150 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 ANXA3P12429 323 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 EVX1P49640 407 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SNRPNP63162 240 aaKnown RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 MFAP5Q13361 173 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 FAM180AQ6UWF9 173 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 COX15Q7KZN9 410 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 KCTD9Q7L273 389 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 MAML2Q8IZL2 1156 aaPredicted RBP12.66□□□□□ -0.38
SCAF4-202ENST00000399804 SHISA5Q8N114 240 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 ACBD4Q8NC06 268 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 MIB2Q96AX9 1013 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 CITED4Q96RK1 184 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 OR51B6Q9H340 312 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 PARPBPQ9NWS1 579 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 APC2O95996 2303 aa12.66□□□□□ -0.38
SCAF4-202ENST00000399804 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 FAM230AA0A1W2PPH8 454 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 A0A1W2PQD3 144 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 FITM1A5D6W6 292 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 RAB3DO95716 219 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 GDNFP39905 211 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 MRPS10P82664 201 aaKnown RBP12.65□□□□□ -0.38
SCAF4-202ENST00000399804 EGR3Q06889 387 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 RSU1Q15404 277 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 ADGRG3Q86Y34 549 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.38
SCAF4-202ENST00000399804 NPEPL1Q8NDH3 523 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 BORCS8Q96FH0 119 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 FXYD6Q9H0Q3 95 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 HTR3BO95264 441 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 LAP3P28838 519 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 BDKRB2P30411 391 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 SCRN3Q0VDG4 424 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 APOOLQ6UXV4 268 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 GDPD3Q7L5L3 318 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 GJC3Q8NFK1 279 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 OR5D18Q8NGL1 313 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 OIT3Q8WWZ8 545 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 FOXRED1Q96CU9 486 aaPredicted RBP12.65□□□□□ -0.38
SCAF4-202ENST00000399804 MED18Q9BUE0 208 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 ZMAT3Q9HA38 289 aaKnown RBP12.65□□□□□ -0.38
SCAF4-202ENST00000399804 C12orf10Q9HB07 376 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 LOC107986453A0A1B0GWG9 222 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 TRIM64A6NGJ6 449 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 TMEM229AB2RXF0 380 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 PTP4A3O75365 173 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 LALBAP00709 142 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 UBCP0CG48 685 aaKnown RBP12.65□□□□□ -0.38
SCAF4-202ENST00000399804 AMY2BP19961 511 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 STARP49675 285 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 SLC25A35Q3KQZ1 300 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 ABCA11PQ4W5N1 156 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 ACER2Q5QJU3 275 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF813Q6ZN06 617 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 OR52N5Q8NH56 324 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 FAM3DQ96BQ1 224 aa12.65□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF223Q9UK11 482 aaPredicted RBP12.65□□□□□ -0.38
SCAF4-202ENST00000399804 GPR171O14626 319 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 PLPP2O43688 288 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 CREBL2O60519 120 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 ZFPL1O95159 310 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 HLA-DMAP28067 261 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 MAGEB1P43366 347 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 ATAD3CQ5T2N8 411 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 B3GNTL1Q67FW5 361 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 CNEP1R1Q8N9A8 125 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 OR51T1Q8NGJ9 327 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 OTOSQ8NHW6 89 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 APOBEC4Q8WW27 367 aaKnown RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 SESN1Q9Y6P5 492 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 LOC102725191A0A1B0GVB3 256 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 C13orf42A0A1B0GVH6 325 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 K7ESF4 209 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 ARPC1BO15143 372 aaKnown RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 TIAF1O95411 115 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 CTLA4P16410 223 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 PCBD1P61457 104 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 SMCO1Q147U7 214 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 BAK1Q16611 211 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 KANSL1Q7Z3B3 1105 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 LSRQ86X29 649 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-202ENST00000399804 ZBTB8AQ96BR9 441 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 SORCS2Q96PQ0 1159 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 DERL3Q96Q80 235 aa12.64□□□□□ -0.39
SCAF4-202ENST00000399804 MGAT4CQ9UBM8 478 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms