RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SCARF2Q96GP6 870 aaPredicted RBP14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 RBM14Q96PK6 669 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 NKX2-4Q9H2Z4 354 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 SMCO4Q9NRQ5 59 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 RXFP3Q9NSD7 469 aa14.48□□□□□ -0.09
CHMP1A-201ENST00000397901 BLOC1S5-TXNDC5H3BN57 136 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 TNFSF14O43557 240 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 CD8AP01732 235 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 KLK3P07288 261 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 ADH7P40394 386 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 LINC01590Q5TEZ4 76 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 OR6N1Q8NGY5 312 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 MIB2Q96AX9 1013 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 ZC3H10Q96K80 434 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 WDR77Q9BQA1 342 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 EDEM2Q9BV94 578 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 NMNAT2Q9BZQ4 307 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 SLITRK2Q9H156 845 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 TMEM127O75204 238 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 GLCEO94923 617 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 SLC25A4P12235 298 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 EIF2S3P41091 472 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 CDKN2AP42771 156 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 HYAL1Q12794 435 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNHIT3Q15649 155 aaPredicted RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 PCGF3Q3KNV8 242 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 C4orf46Q504U0 113 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 SLC35D3Q5M8T2 416 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 BEND4Q6ZU67 534 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF550Q7Z398 422 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 DND1Q8IYX4 353 aaKnown RBP14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 OR5AK2Q8NH90 309 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 PMM1Q92871 262 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 FAM131CQ96AQ9 280 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 SPACA7Q96KW9 195 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 UQCC1Q9NVA1 299 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 TREM2Q9NZC2 230 aa14.47□□□□□ -0.09
CHMP1A-201ENST00000397901 HEATR5AQ86XA9 2040 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 ARHGEF17Q96PE2 2063 aaPredicted RBP14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 CLN5O75503 358 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 RNF224P0DH78 156 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 CALCBP10092 127 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 TNFRSF4P43489 277 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 PPT1P50897 306 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 SRSF3P84103 164 aaKnown RBP14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 Q499Y3 187 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 FAM76BQ5HYJ3 339 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 LIPNQ5VXI9 398 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 FAM220AQ7Z4H9 259 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 C10orf53Q8N6V4 93 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 CSNK1A1LQ8N752 337 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 RPS4Y2Q8TD47 263 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 ADAD1Q96M93 576 aaKnown RBP14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 GAL3ST1Q99999 423 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 LRIT1Q9P2V4 623 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 EML5Q05BV3 1969 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 CACNA1CQ13936 2221 aa14.46□□□□□ -0.09
CHMP1A-201ENST00000397901 MEIS3P1A6NDR6 274 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 ARGFXA6NJG6 315 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 HCRTR1O43613 425 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 CTSBP07858 339 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 AQP2P41181 271 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 RPS27P42677 84 aaKnown RBP14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 DEFB110Q30KQ9 67 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 C9orf152Q5JTZ5 239 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF684Q5T5D7 378 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 YOD1Q5VVQ6 348 aaPredicted RBP14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 ACOT7LQ6ZUV0 252 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 GLB1L2Q8IW92 636 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 SFTPA2Q8IWL1 248 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 GTPBP8Q8N3Z3 284 aaPredicted RBP14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 GATSQ8NAP1 163 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 OR4C16Q8NGL9 310 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 OR10AC1Q8NH08 325 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 APMAPQ9HDC9 416 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 FRRS1LQ9P0K9 344 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 MRM2Q9UI43 246 aaKnown RBP14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 IKZF2Q9UKS7 526 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 ZNF337Q9Y3M9 751 aa14.46□□□□□ -0.1
CHMP1A-201ENST00000397901 TRAV8-7A0A075B6U6 113 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 A0A087WUJ7 227 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 TVP23AA6NH52 213 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 OR5H14A6NHG9 310 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 RHPN2P1A8MT19 583 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 H7C1C5 153 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 PRKNO60260 465 aaPredicted RBP14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 CSTAP01040 98 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 ANXA2P07355 339 aaKnown RBP14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 CD79AP11912 226 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 AGAP20933 346 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 PPP1CAP62136 330 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 LCN6P62502 163 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 LTBQ06643 244 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 KCNAB1Q14722 419 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 KLHL26Q53HC5 615 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 LY6G6FQ5SQ64 297 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 C11orf87Q6NUJ2 197 aa14.45□□□□□ -0.1
CHMP1A-201ENST00000397901 NPSR1Q6W5P4 371 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms