RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 NSMAFQ92636 917 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 NABP1Q96AH0 204 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 FAM46AQ96IP4 442 aaKnown RBP12.01□□□□□ -0.49
SEC13-204ENST00000397099 NRIP3Q9NQ35 241 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 REV1Q9UBZ9 1251 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 TMCC3Q9ULS5 477 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 SIGLEC7Q9Y286 467 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 UGT2A1Q9Y4X1 527 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
SEC13-204ENST00000397099 PRSS37A4D1T9 235 aa12□□□□□ -0.49
SEC13-204ENST00000397099 UNC119BA6NIH7 251 aa12□□□□□ -0.49
SEC13-204ENST00000397099 VWC2LB2RUY7 222 aa12□□□□□ -0.49
SEC13-204ENST00000397099 IMPA2O14732 288 aa12□□□□□ -0.49
SEC13-204ENST00000397099 CRLF1O75462 422 aa12□□□□□ -0.49
SEC13-204ENST00000397099 STAMBPO95630 424 aa12□□□□□ -0.49
SEC13-204ENST00000397099 SEMG1P04279 462 aa12□□□□□ -0.49
SEC13-204ENST00000397099 PATE4P0C8F1 98 aa12□□□□□ -0.49
SEC13-204ENST00000397099 DAOP14920 347 aa12□□□□□ -0.49
SEC13-204ENST00000397099 ZNF250P15622 560 aa12□□□□□ -0.49
SEC13-204ENST00000397099 STOMP27105 288 aa12□□□□□ -0.49
SEC13-204ENST00000397099 GIFP27352 417 aa12□□□□□ -0.49
SEC13-204ENST00000397099 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
SEC13-204ENST00000397099 ERVK-25P63136 954 aa12□□□□□ -0.49
SEC13-204ENST00000397099 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
SEC13-204ENST00000397099 TMEM249Q2WGJ8 235 aa12□□□□□ -0.49
SEC13-204ENST00000397099 PABPC1L2AQ5JQF8 200 aa12□□□□□ -0.49
SEC13-204ENST00000397099 FAM209AQ5JX71 171 aa12□□□□□ -0.49
SEC13-204ENST00000397099 DNM1P34Q6PK57 102 aa12□□□□□ -0.49
SEC13-204ENST00000397099 FAM122BQ7Z309 247 aa12□□□□□ -0.49
SEC13-204ENST00000397099 IGFN1Q86VF2 1251 aa12□□□□□ -0.49
SEC13-204ENST00000397099 ZNF786Q8N393 782 aa12□□□□□ -0.49
SEC13-204ENST00000397099 FGFBP3Q8TAT2 258 aa12□□□□□ -0.49
SEC13-204ENST00000397099 SYNPRQ8TBG9 265 aa12□□□□□ -0.49
SEC13-204ENST00000397099 RSRC1Q96IZ7 334 aaKnown RBP12□□□□□ -0.49
SEC13-204ENST00000397099 FUZQ9BT04 418 aa12□□□□□ -0.49
SEC13-204ENST00000397099 MRPL37Q9BZE1 423 aaKnown RBP12□□□□□ -0.49
SEC13-204ENST00000397099 C1orf21Q9H246 121 aa12□□□□□ -0.49
SEC13-204ENST00000397099 NDRG4Q9ULP0 352 aaKnown RBP12□□□□□ -0.49
SEC13-204ENST00000397099 YLPM1P49750 1951 aaKnown RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 IGLV3-9A0A075B6K5 115 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 A0A096LNT2 108 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 TRBV4-1A0A0J9YWV2 114 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 B2RBV5 119 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 IDH3BO43837 385 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 ICMTO60725 284 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 TXNDC12O95881 172 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 ADRA2AP08913 450 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 COX5BP10606 129 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 ZNF32P17041 273 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 FPR3P25089 353 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 CRABP1P29762 137 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 CDAP32320 146 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 LIPAP38571 399 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 NR4A2P43354 598 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 GZMKP49863 264 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 GDI2P50395 445 aaKnown RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 SPIBQ01892 262 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 FMODQ06828 376 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 SCRN3Q0VDG4 424 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 KRR1Q13601 381 aaKnown RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 GK3PQ14409 553 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 PCGF3Q3KNV8 242 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 IQCCQ4KMZ1 466 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 CYB5R2Q6BCY4 276 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 RPL13AP3Q6NVV1 102 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 ZDHHC21Q8IVQ6 265 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 FAM86B1Q8N7N1 296 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 UBASH3BQ8TF42 649 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 SNX33Q8WV41 574 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 IPCEF1Q8WWN9 437 aaPredicted RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 MAGIXQ9H6Y5 334 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 ELOVL3Q9HB03 270 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 TMEM160Q9NX00 188 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 VSX1Q9NZR4 365 aaPredicted RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 CGGBP1Q9UFW8 167 aaPredicted RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 DUSP13Q9UII6 198 aa11.99□□□□□ -0.49
SEC13-204ENST00000397099 PRPF19Q9UMS4 504 aaKnown RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 SONP18583 2426 aaKnown RBP11.99□□□□□ -0.49
SEC13-204ENST00000397099 TEX13CA0A0J9YWL9 993 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 A0A1W2PPL8 197 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 A0A1W2PPW3 197 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 A8MV72 311 aaPredicted RBP11.98□□□□□ -0.49
SEC13-204ENST00000397099 GPRIN2O60269 458 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 OR10H3O60404 316 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 KHDRBS3O75525 346 aaKnown RBP11.98□□□□□ -0.49
SEC13-204ENST00000397099 LCKP06239 509 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 FUT4P22083 530 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 APEX1P27695 318 aaKnown RBP11.98□□□□□ -0.49
SEC13-204ENST00000397099 LAP3P28838 519 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 SLC6A6P31641 620 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 ARHGDIAP52565 204 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 HMGA2P52926 109 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 LSM6P62312 80 aaKnown RBP11.98□□□□□ -0.49
SEC13-204ENST00000397099 PSG4Q00888 419 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 TRIM25Q14258 630 aaKnown RBP11.98□□□□□ -0.49
SEC13-204ENST00000397099 NKPD1Q17RQ9 610 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 MESTQ5EB52 335 aa11.98□□□□□ -0.49
SEC13-204ENST00000397099 GLB1L2Q8IW92 636 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms