RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ITSN1Q15811 1721 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 FGD6Q6ZV73 1430 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NAV1Q8NEY1 1877 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 MED1Q15648 1581 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ARHGAP35Q9NRY4 1499 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ADCY9O60503 1353 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 FAM240BA0A1B0GVZ2 78 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 A0A1W2PPE3 182 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 FUOMA2VDF0 154 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 PSMB11A5LHX3 300 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF233A6NK53 670 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 FOXE1O00358 373 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 AQP9O43315 295 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CDH16O75309 829 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SUPT3HO75486 399 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SUPT7LO94864 414 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ACTL6AO96019 429 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 IFNA14P01570 189 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SERPINA5P05154 406 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 IL6P05231 212 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 S100A9P06702 114 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ASGR1P07306 291 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 DNAH10OSP0CZ25 163 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ICAM2P13598 275 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CCNB1P14635 433 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CD1EP15812 388 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 PRKACAP17612 351 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ELK1P19419 428 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 FUT3P21217 361 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CCNE1P24864 410 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CXCR2P25025 360 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 IL12AP29459 219 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 GTF2H1P32780 548 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 TALDO1P37837 337 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 RBMXP38159 391 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 NOVP48745 357 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 HCAR3P49019 387 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 TUFMP49411 452 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CAV2P51636 162 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 KPNA2P52292 529 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CDH4P55283 916 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 GNG2P59768 71 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 RAB14P61106 215 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SELENOTP62341 195 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 OGDHQ02218 1023 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 TLE4Q04727 773 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SCRN3Q0VDG4 424 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ITGB3BPQ13352 177 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ITIH4Q14624 930 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 IL17AQ16552 155 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 MICBQ29980 383 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 C6orf226Q5I0X4 101 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CTSL3PQ5NE16 218 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SAPCD1Q5SSQ6 148 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CLVS2Q5SYC1 327 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CASC10Q5T4H9 136 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 TIGD3Q6B0B8 471 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ELP2Q6IA86 826 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 H2BFWTQ7Z2G1 175 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SLC26A11Q86WA9 606 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CLVS1Q8IUQ0 354 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 IFT20Q8IY31 132 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ST13P4Q8IZP2 240 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 MREGQ8N565 214 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 NATD1Q8N6N6 113 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CCNYL1Q8N7R7 359 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF740Q8NDX6 193 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 OR10G3Q8NGC4 313 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 FAM110BQ8TC76 370 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 PYROXD1Q8WU10 500 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 DYDC1Q8WWB3 177 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 DCUN1D4Q92564 292 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CMTM7Q96FZ5 175 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 TMEM101Q96IK0 257 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ATP6V1G3Q96LB4 118 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 TCEANC2Q96MN5 208 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 CCDC77Q9BR77 488 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 SIKE1Q9BRV8 207 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 POLR2J2Q9GZM3 115 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 POLR2J3Q9H1A7 115 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 XKR8Q9H6D3 395 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 NARFLQ9H6Q4 476 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 PDFQ9HBH1 243 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 IL26Q9NPH9 171 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 AIG1Q9NVV5 245 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 ASF1AQ9Y294 204 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 AP3M1Q9Y2T2 418 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 NPTNQ9Y639 398 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 RAI1Q7Z5J4 1906 aaPredicted RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 PKD1L2Q7Z442 2459 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 PARP4Q9UKK3 1724 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 MARF1Q9Y4F3 1742 aaKnown RBP2.16□□□□□ -2.06
PTPRC-205ENST00000391970 THSD7BQ9C0I4 1608 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 RIC1Q4ADV7 1423 aa2.16□□□□□ -2.06
PTPRC-205ENST00000391970 NWD1Q149M9 1564 aa2.15□□□□□ -2.06
PTPRC-205ENST00000391970 BCL9LQ86UU0 1499 aa2.15□□□□□ -2.06
PTPRC-205ENST00000391970 ARHGAP23Q9P227 1491 aa2.15□□□□□ -2.06
PTPRC-205ENST00000391970 FRMPD3Q5JV73 1810 aa2.15□□□□□ -2.06
PTPRC-205ENST00000391970 RFX7Q2KHR2 1363 aa2.15□□□□□ -2.07
PTPRC-205ENST00000391970 DDX60Q8IY21 1712 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms